RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CHKAP35790 457 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 ACADSBP45954 432 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 MRPS21P82921 87 aaKnown RBP13.53□□□□□ -0.24
XRN1-203ENST00000463916 APTXQ7Z2E3 356 aaKnown RBP13.53□□□□□ -0.24
XRN1-203ENST00000463916 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 FAM149B1Q96BN6 582 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 XPO6Q96QU8 1125 aaKnown RBP13.53□□□□□ -0.24
XRN1-203ENST00000463916 GANQ9H2C0 597 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 LHX5Q9H2C1 402 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 EML5Q05BV3 1969 aa13.53□□□□□ -0.24
XRN1-203ENST00000463916 HARS2P49590 506 aaKnown RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 COPB1P53618 953 aaKnown RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 CRY1Q16526 586 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 C1orf131Q8NDD1 294 aaKnown RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 DQX1Q8TE96 717 aaKnown RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 ACDQ96AP0 544 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 ACOX2Q99424 681 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 LIMA1Q9UHB6 759 aaKnown RBP13.52□□□□□ -0.24
XRN1-203ENST00000463916 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.24
XRN1-203ENST00000463916 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 GFRA2O00451 464 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 TSPAN3O60637 253 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 CYP11B1P15538 503 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 KRT9P35527 623 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 DGKGP49619 791 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 SGSHP51688 502 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 SIM2Q14190 667 aaPredicted RBP13.52□□□□□ -0.25
XRN1-203ENST00000463916 PRR23BQ6ZRT6 265 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 CPXM2Q8N436 756 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 AOPEPQ8N6M6 819 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 CCDC26Q8TAB7 109 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
XRN1-203ENST00000463916 RUBCNQ92622 972 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 GOLGA1Q92805 767 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 STK33Q9BYT3 514 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.25
XRN1-203ENST00000463916 STOML2Q9UJZ1 356 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 SIK3Q9Y2K2 1263 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 STARD13Q9Y3M8 1113 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.25
XRN1-203ENST00000463916 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 GOLGA6L7A0A1B0GV03 622 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 F8VZ95 297 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 ERBB2P04626 1255 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 YWHAZP63104 245 aaKnown RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 EGFLAMQ63HQ2 1017 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 ZNF513Q8N8E2 541 aaPredicted RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 DDI1Q8WTU0 396 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 EBF1Q9UH73 591 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 DCLK1O15075 740 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 AXIN1O15169 862 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 APBB3O95704 486 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 SLC6A4P31645 630 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 CNR2P34972 360 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 WASP42768 502 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 TBX4P57082 545 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 POLR2FP61218 127 aaKnown RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 GEN1Q17RS7 908 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 FAM133BQ5BKY9 247 aaKnown RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 TAF3Q5VWG9 929 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 NADSYN1Q6IA69 706 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 ANO7Q6IWH7 933 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 RFWD3Q6PCD5 774 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 NOP9Q86U38 636 aaKnown RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 TAC4Q86UU9 113 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 DHX40Q8IX18 779 aaKnown RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 MDGA1Q8NFP4 955 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 MYEOVQ96EZ4 313 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 SLC39A13Q96H72 371 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 FCRL2Q96LA5 508 aaPredicted RBP13.51□□□□□ -0.25
XRN1-203ENST00000463916 HINFPQ9BQA5 517 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 POPDC2Q9HBU9 364 aa13.51□□□□□ -0.25
XRN1-203ENST00000463916 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
XRN1-203ENST00000463916 GRAP2O75791 330 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 HOXD9P28356 352 aaPredicted RBP13.5□□□□□ -0.25
XRN1-203ENST00000463916 BPIFB4P59827 614 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 RING1Q06587 406 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 SYCP1Q15431 976 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 PREPLQ4J6C6 727 aaPredicted RBP13.5□□□□□ -0.25
XRN1-203ENST00000463916 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 BEND5Q7L4P6 421 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 TSTD1Q8NFU3 115 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 GAB3Q8WWW8 586 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 ERLEC1Q96DZ1 483 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 FUCA2Q9BTY2 467 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
XRN1-203ENST00000463916 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms