RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RGS7P49802 495 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 MFAP3P55082 362 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 IRX4P78413 519 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 KCNH2Q12809 1159 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 TRIP4Q15650 581 aaPredicted RBP19.72■□□□□ 0.75
SF3A1-205ENST00000463818 SPDYCQ5MJ68 293 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 CPXM2Q8N436 756 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 SLC35F5Q8WV83 523 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 ZSWIM1Q9BR11 485 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 LSM14BQ9BX40 385 aaKnown RBP19.72■□□□□ 0.75
SF3A1-205ENST00000463818 SRRTQ9BXP5 876 aaKnown RBP19.72■□□□□ 0.75
SF3A1-205ENST00000463818 CALCOCO1Q9P1Z2 691 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 SFMBT1Q9UHJ3 866 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 CLEC4EQ9ULY5 219 aa19.72■□□□□ 0.75
SF3A1-205ENST00000463818 HBS1LQ9Y450 684 aaKnown RBP19.72■□□□□ 0.75
SF3A1-205ENST00000463818 LNP1A1A4G5 178 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 GABBR2O75899 941 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 GNA14O95837 355 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 CALCAP01258 141 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 NDUFV2P19404 249 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 HARS2P49590 506 aaKnown RBP19.71■□□□□ 0.75
SF3A1-205ENST00000463818 DAOAP59103 153 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 GEN1Q17RS7 908 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 PMF1Q6P1K2 205 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 SLC36A4Q6YBV0 504 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 ARHGEF19Q8IW93 802 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 TRIM59Q8IWR1 403 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 SCML4Q8N228 414 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 DEFB119Q8N690 84 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 DDI1Q8WTU0 396 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 PIWIL1Q96J94 861 aaKnown RBP19.71■□□□□ 0.75
SF3A1-205ENST00000463818 CNGB3Q9NQW8 809 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 ABCC13Q9NSE7 274 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 TMEM74BQ9NUR3 256 aa19.71■□□□□ 0.75
SF3A1-205ENST00000463818 PIK3R2O00459 728 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 TSPAN3O60637 253 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 BRD2P25440 801 aaKnown RBP19.7■□□□□ 0.74
SF3A1-205ENST00000463818 PAK1Q13153 545 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 SYT12Q8IV01 421 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 FAM217AQ8IXS0 508 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 RBBP8NLQ8NC74 664 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-205ENST00000463818 CNTNAP3BQ96NU0 1288 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 CNTNAP3Q9BZ76 1288 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 SLC6A17Q9H1V8 727 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 THAP10Q9P2Z0 257 aaPredicted RBP19.7■□□□□ 0.74
SF3A1-205ENST00000463818 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.7■□□□□ 0.74
SF3A1-205ENST00000463818 STON1Q9Y6Q2 735 aa19.7■□□□□ 0.74
SF3A1-205ENST00000463818 CNOT1A5YKK6 2376 aaKnown RBP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 AP5Z1O43299 807 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 ZNF217O75362 1048 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 KCNK5O95279 499 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 MARSP56192 900 aaKnown RBP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 GCNT1Q02742 428 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 RPL6Q02878 288 aaKnown RBP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 STILQ15468 1287 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 TRIM61Q5EBN2 209 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 N4BP2L1Q5TBK1 243 aaPredicted RBP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 DAB2IPQ5VWQ8 1189 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 LYSMD4Q5XG99 296 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 UCMAQ8WVF2 138 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 SLC2A11Q9BYW1 496 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 TMEM9BQ9NQ34 198 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 ELOVL2Q9NXB9 296 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 EVLQ9UI08 416 aaPredicted RBP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 CYP8B1Q9UNU6 501 aa19.69■□□□□ 0.74
SF3A1-205ENST00000463818 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.69■□□□□ 0.74
SF3A1-205ENST00000463818 GON4LQ3T8J9 2241 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 IGHV1OR15-9A0A0B4J2B8 117 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 M0QYV0 167 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 CDX4O14627 284 aaPredicted RBP19.68■□□□□ 0.74
SF3A1-205ENST00000463818 AFPP02771 609 aaKnown RBP19.68■□□□□ 0.74
SF3A1-205ENST00000463818 ITPKAP23677 461 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 ZNF132P52740 706 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 MPPE1Q53F39 396 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 ANKS1BQ7Z6G8 1248 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 IRGQQ8WZA9 623 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 TMA16Q96EY4 203 aaKnown RBP19.68■□□□□ 0.74
SF3A1-205ENST00000463818 MRGPRX1Q96LB2 322 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 HSFY1Q96LI6 401 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 KREMEN1Q96MU8 473 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 NUSAP1Q9BXS6 441 aaKnown RBP19.68■□□□□ 0.74
SF3A1-205ENST00000463818 INTS2Q9H0H0 1204 aaKnown RBP19.68■□□□□ 0.74
SF3A1-205ENST00000463818 STOML2Q9UJZ1 356 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 PILRBQ9UKJ0 227 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 THADAQ6YHU6 1953 aa19.68■□□□□ 0.74
SF3A1-205ENST00000463818 NPC1O15118 1278 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 MSI1O43347 362 aaKnown RBP19.67■□□□□ 0.74
SF3A1-205ENST00000463818 FGFR1OPO95684 399 aaKnown RBP19.67■□□□□ 0.74
SF3A1-205ENST00000463818 DPP6P42658 865 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 IL12RB1P42701 662 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 ZNF33AQ06730 810 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 STARD3Q14849 445 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 ADGRF1Q5T601 910 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 KIAA1324Q6UXG2 1013 aaKnown RBP19.67■□□□□ 0.74
SF3A1-205ENST00000463818 CLEC4CQ8WTT0 213 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 UBE2TQ9NPD8 197 aaPredicted RBP19.67■□□□□ 0.74
SF3A1-205ENST00000463818 KIAA1468Q9P260 1216 aa19.67■□□□□ 0.74
SF3A1-205ENST00000463818 TIMM44O43615 452 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 LATS1O95835 1130 aa19.66■□□□□ 0.74
SF3A1-205ENST00000463818 LMAN2Q12907 356 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms