RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 CHPFQ8IZ52 775 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 PGBD3Q8N328 593 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 FAM160A2Q8N612 972 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-203ENST00000463172 SHC3Q92529 594 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 BHMTQ93088 406 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 ZC3H10Q96K80 434 aaKnown RBP13.67□□□□□ -0.22
HDAC1-203ENST00000463172 MIS12Q9H081 205 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 ANO10Q9NW15 660 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 SFMBT1Q9UHJ3 866 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 SLC27A6Q9Y2P4 619 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 PCDHGA5Q9Y5G8 931 aa13.67□□□□□ -0.22
HDAC1-203ENST00000463172 TCRBV21S2A2A0A5A6 115 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 SGK1O00141 431 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 GFRA2O00451 464 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 PIK3R2O00459 728 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 IRAK2O43187 625 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 NCAM1P13591 858 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 HOXB2P14652 356 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 RPL34P49207 117 aaKnown RBP13.66□□□□□ -0.22
HDAC1-203ENST00000463172 TBX4P57082 545 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 FOXK2Q01167 660 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 RING1Q06587 406 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 SPEM2Q0P670 501 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 PUM1Q14671 1186 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■■■■■ 29.1
HDAC1-203ENST00000463172 STARD3Q14849 445 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
HDAC1-203ENST00000463172 CSRP2Q16527 193 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 ADGRF1Q5T601 910 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 BEND5Q7L4P6 421 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
HDAC1-203ENST00000463172 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 PLK2Q9NYY3 685 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 DNAJC12Q9UKB3 198 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 NFE2L3Q9Y4A8 694 aa13.66□□□□□ -0.22
HDAC1-203ENST00000463172 THADAQ6YHU6 1953 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 MAP3K13O43283 966 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 TIMM44O43615 452 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 EPN2O95208 641 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 NNTQ13423 1086 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 TCP11X2Q5H9J9 407 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 FKBP15Q5T1M5 1219 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 EMC10Q5UCC4 262 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 FYB2Q5VWT5 728 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 GJB7Q6PEY0 223 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 FAM217AQ8IXS0 508 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 C12orf50Q8NA57 414 aaPredicted RBP13.65□□□□□ -0.22
HDAC1-203ENST00000463172 IPO4Q8TEX9 1081 aaKnown RBP13.65□□□□□ -0.22
HDAC1-203ENST00000463172 HMGB4Q8WW32 186 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 AZIN2Q96A70 460 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 TMA16Q96EY4 203 aaKnown RBP13.65□□□□□ -0.22
HDAC1-203ENST00000463172 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 TPSD1Q9BZJ3 242 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 POPDC2Q9HBU9 364 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 SEMA4GQ9NTN9 838 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
HDAC1-203ENST00000463172 SLC12A6Q9UHW9 1150 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 STOML2Q9UJZ1 356 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 FBXO10Q9UK96 956 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 CDV3Q9UKY7 258 aaKnown RBP13.65□□□□□ -0.22
HDAC1-203ENST00000463172 PCDHGC3Q9UN70 934 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 TLR6Q9Y2C9 796 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 DAAM1Q9Y4D1 1078 aa13.65□□□□□ -0.22
HDAC1-203ENST00000463172 ZNF217O75362 1048 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 APOEP02649 317 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 GLI1P08151 1106 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 HNRNPLP14866 589 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■□□□□ 10.5
HDAC1-203ENST00000463172 DPP6P42658 865 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
HDAC1-203ENST00000463172 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 MTA1Q13330 715 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 PDCLQ13371 301 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 STX1AQ16623 288 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 PLK5Q496M5 336 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 HSP90AA4PQ58FG1 418 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 TMEM92Q6UXU6 159 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 ERMP1Q7Z2K6 904 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 KBTBD6Q86V97 674 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 MDGA1Q8NFP4 955 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 WFIKKN2Q8TEU8 576 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
HDAC1-203ENST00000463172 LHX5Q9H2C1 402 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 VPS45Q9NRW7 570 aa13.64□□□□□ -0.23
HDAC1-203ENST00000463172 SAMSN1Q9NSI8 373 aaKnown RBP13.64□□□□□ -0.23
HDAC1-203ENST00000463172 BECN2A8MW95 431 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 PRRT4C9JH25 899 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 E5RJQ4 531 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms