RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 SYT11Q9BT88 431 aa12.6□□□□□ -0.39
HPS1-206ENST00000462743 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
HPS1-206ENST00000462743 TLR6Q9Y2C9 796 aa12.6□□□□□ -0.39
HPS1-206ENST00000462743 RIF1Q5UIP0 2472 aaKnown RBP12.6□□□□□ -0.39
HPS1-206ENST00000462743 CAPN9O14815 690 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 SCAMP3O14828 347 aaKnown RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 CACNG3O60359 315 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 TRUB2O95900 331 aaKnown RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 EGFP01133 1207 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 PENKP01210 267 aaPredicted RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 MMP8P22894 467 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 HOXA6P31267 233 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 NOS2P35228 1153 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 PRKCIP41743 596 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 GRIA2P42262 883 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 SLC6A11P48066 632 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 CDK17Q00537 523 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 ADGRF1Q5T601 910 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 DENND1CQ8IV53 801 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 DEFB106AQ8N104 65 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 EZH1Q92800 747 aaPredicted RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 NT5C3BQ969T7 300 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 PIWIL1Q96J94 861 aaKnown RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 FCRL2Q96LA5 508 aaPredicted RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 PCDHB18PQ96TA0 734 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 AGPAT1Q99943 283 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
HPS1-206ENST00000462743 RAPGEFL1Q9UHV5 662 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 STARD13Q9Y3M8 1113 aa12.59□□□□□ -0.39
HPS1-206ENST00000462743 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
HPS1-206ENST00000462743 A0A1W2PQJ5 194 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 K7EQS6 105 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 IRAK2O43187 625 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 LAMTOR5O43504 91 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 ACSL4O60488 711 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 ATG13O75143 517 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 TULP3O75386 442 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 HMBSP08397 361 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 CHRM1P11229 460 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 MATKP42679 507 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 CXCL12P48061 93 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 CCR3P51677 355 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 GSCP56915 257 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 MRPS21P82921 87 aaKnown RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 CENPCQ03188 943 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 PTP4A2Q12974 167 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 MTAPQ13126 283 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 MTA1Q13330 715 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 MPP7Q5T2T1 576 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 FYB2Q5VWT5 728 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 XYLT1Q86Y38 959 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 KCNV2Q8TDN2 545 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 CPA5Q8WXQ8 436 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 SYN2Q92777 582 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 PGAP3Q96FM1 320 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 XPO6Q96QU8 1125 aaKnown RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 NPY6RQ99463 290 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 RBM12Q9NTZ6 932 aaKnown RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
HPS1-206ENST00000462743 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 DEC1Q9P2X7 70 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 TMEM59LQ9UK28 342 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.4
HPS1-206ENST00000462743 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 KCNU1A8MYU2 1149 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 MSI1O43347 362 aaKnown RBP12.57□□□□□ -0.4
HPS1-206ENST00000462743 DAB1O75553 588 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 KAT7O95251 611 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 APODP05090 189 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 SLC2A3P11169 496 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 GZMAP12544 262 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 TDGF1P13385 188 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 TYRP14679 529 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 GBP1P32455 592 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 SLC11A2P49281 568 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 CLEC16AQ2KHT3 1053 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 ANO4Q32M45 955 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 HSF5Q4G112 596 aaPredicted RBP12.57□□□□□ -0.4
HPS1-206ENST00000462743 MPPE1Q53F39 396 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 SFMBT2Q5VUG0 894 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 PPP1R2P3Q6NXS1 205 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 TPGS1Q6ZTW0 290 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 NUDT18Q6ZVK8 323 aa12.57□□□□□ -0.4
HPS1-206ENST00000462743 TAC4Q86UU9 113 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms