RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PYROXD2Q8N2H3 581 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 SLC7A14Q8TBB6 771 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 CSPG4P5Q96PW8 444 aa15.02■□□□□ -0
HDAC6-213ENST00000462730 RBM15Q96T37 977 aaKnown RBP eCLIP15.02■□□□□ -0
HDAC6-213ENST00000462730 PATJQ8NI35 1801 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 TLDC2A0PJX2 215 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 SYN3O14994 580 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 TTC4O95801 387 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 OR4Q2P0C623 313 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 ZFXP17010 805 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 HPDP32754 393 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 LSP1P33241 339 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 RFC2P35250 354 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 KYNUQ16719 465 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 BHLHA9Q7RTU4 235 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 PCGF5Q86SE9 256 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 TAB3Q8N5C8 712 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 EPS8L3Q8TE67 593 aaKnown RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 PRCCQ92733 491 aaPredicted RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 SAYSD1Q9NPB0 183 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 PCDH10Q9P2E7 1040 aa15.02□□□□□ -0.01
HDAC6-213ENST00000462730 NOVA2Q9UNW9 492 aaKnown RBP15.02□□□□□ -0.01
HDAC6-213ENST00000462730 COL4A6Q14031 1691 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 OAZ2O95190 189 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 MAP3K6O95382 1288 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 ALDH2P05091 517 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 NCAM1P13591 858 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 ARL4AP40617 200 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 GUCY1A3Q02108 690 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 VARS2Q5ST30 1063 aaKnown RBP15.01□□□□□ -0.01
HDAC6-213ENST00000462730 FAM171A1Q5VUB5 890 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 NECAB2Q7Z6G3 386 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 SPATA2LQ8IUW3 424 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-213ENST00000462730 PSTKQ8IV42 348 aaKnown RBP15.01□□□□□ -0.01
HDAC6-213ENST00000462730 PPIL6Q8IXY8 311 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 ADAM32Q8TC27 787 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 CPT1BQ92523 772 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 TACO1Q9BSH4 297 aaKnown RBP15.01□□□□□ -0.01
HDAC6-213ENST00000462730 TMEM109Q9BVC6 243 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 COLEC11Q9BWP8 271 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 GPR62Q9BZJ7 368 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 TMPRSS4Q9NRS4 437 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 PIGVQ9NUD9 493 aa15.01□□□□□ -0.01
HDAC6-213ENST00000462730 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-213ENST00000462730 TRIM43BA6NCK2 446 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 NT5C1B-RDH14C9J2C7 533 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 GALTP07902 379 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 GOT1P17174 413 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 STIP1P31948 543 aaKnown RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 MAGEA4P43358 317 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 NRLP54845 237 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 ANKRD22Q5VYY1 191 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 C4orf50Q6ZRC1 276 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 CROCCP2Q86T23 111 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 TMEM173Q86WV6 379 aaPredicted RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 CEP57Q86XR8 500 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 RELL1Q8IUW5 271 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 IRGQQ8WZA9 623 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 TRIM43Q96BQ3 446 aaPredicted RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 TLCD1Q96CP7 247 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 B3GALT6Q96L58 329 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 C9orf72Q96LT7 481 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 TMEM175Q9BSA9 504 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 TMEM106CQ9BVX2 250 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 EPN3Q9H201 632 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 USP3Q9Y6I4 520 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 SF3B1O75533 1304 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■■■ 66.8
HDAC6-213ENST00000462730 CFAP69A5D8W1 941 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 H3BRJ5 948 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 GOLGA8MH3BSY2 632 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 RASGRF2O14827 1237 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 RGS16O15492 202 aaPredicted RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 KCNN4O15554 427 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 TIMP1P01033 207 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 CSF2RAP15509 400 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 AMPD1P23109 780 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 SLCO1A2P46721 670 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 MAGOHP61326 146 aaKnown RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 GBE1Q04446 702 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 SLC39A12Q504Y0 691 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 EFHC2Q5JST6 749 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 C6orf118Q5T5N4 469 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 FUT10Q6P4F1 479 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 CDKL3Q8IVW4 592 aaPredicted RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 EDEM1Q92611 657 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 ZCWPW1Q9H0M4 648 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 USP29Q9HBJ7 922 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 RCOR3Q9P2K3 495 aaPredicted RBP15□□□□□ -0.01
HDAC6-213ENST00000462730 MFHAS1Q9Y4C4 1052 aa15□□□□□ -0.01
HDAC6-213ENST00000462730 BCLAF3A2AJT9 711 aaKnown RBP14.99□□□□□ -0.01
HDAC6-213ENST00000462730 DGKIO75912 1065 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 RBL1P28749 1068 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 BASP1P80723 227 aaKnown RBP14.99□□□□□ -0.01
HDAC6-213ENST00000462730 NCBP2-AS2Q69YL0 99 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 NAT8LQ8N9F0 302 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 LRRN4Q8WUT4 740 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 PGM2Q96G03 612 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 PNPLA8Q9NP80 782 aa14.99□□□□□ -0.01
HDAC6-213ENST00000462730 ETNK2Q9NVF9 386 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms