RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MED15Q96RN5 788 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 PPP1R9BQ96SB3 815 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 DPYSL5Q9BPU6 564 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 REEP2Q9BRK0 252 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 OSBPL6Q9BZF3 934 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 TRIM5Q9C035 493 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 MEGF9Q9H1U4 602 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 C12orf65Q9H3J6 166 aaKnown RBP8□□□□□ -1.13
UBE4B-204ENST00000462658 ZHX3Q9H4I2 956 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 ZNF302Q9NR11 478 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 PDGFCQ9NRA1 345 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 ANKEF1Q9NU02 776 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 KCND2Q9NZV8 630 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 PPP4R1LQ9P1A2 415 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 NFE2L3Q9Y4A8 694 aa8□□□□□ -1.13
UBE4B-204ENST00000462658 MKI67P46013 3256 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 IGKV6D-21A0A0A0MT36 114 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 RSPH10B2B2RC85 870 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 NRP2O60462 931 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 FSBPO95073 299 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 STBD1O95210 358 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SNAI1O95863 264 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 RSPH10BP0C881 870 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 GAP43P17677 238 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 CCNE1P24864 410 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 ZNF75DP51815 510 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 RAC3P60763 192 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 ACVR2BQ13705 512 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 LRRC41Q15345 812 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 MUM1Q2TAK8 710 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 XKR9Q5GH70 373 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 XKR3Q5GH77 459 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 UTP14CQ5TAP6 766 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 FAM160B1Q5W0V3 765 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SARM1Q6SZW1 724 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 TRMT1LQ7Z2T5 733 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 LIMS2Q7Z4I7 341 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 GUF1Q8N442 669 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 MSL3Q8N5Y2 521 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 KIAA0895Q8NCT3 520 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 USP6NLQ92738 828 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SLC7A6OSQ96CW6 309 aaPredicted RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 FAXDC2Q96IV6 333 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SPATA33Q96N06 139 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 GNRHR2Q96P88 292 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 LMF1Q96S06 567 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 HSD3B7Q9H2F3 369 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 ABHD16BQ9H3Z7 469 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 IFT122Q9HBG6 1241 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 POLD4Q9HCU8 107 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SAMSN1Q9NSI8 373 aaKnown RBP7.99□□□□□ -1.13
UBE4B-204ENST00000462658 MKS1Q9NXB0 559 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 TBC1D7Q9P0N9 293 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 ODF2LQ9ULJ1 636 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 SYNRGQ9UMZ2 1314 aa7.99□□□□□ -1.13
UBE4B-204ENST00000462658 TNRC18O15417 2968 aaPredicted RBP7.98□□□□□ -1.13
UBE4B-204ENST00000462658 BICDL2A1A5D9 508 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 TMEM150BA6NC51 233 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 TNPO2O14787 897 aaKnown RBP7.98□□□□□ -1.13
UBE4B-204ENST00000462658 USO1O60763 962 aaKnown RBP7.98□□□□□ -1.13
UBE4B-204ENST00000462658 KIF20AO95235 890 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PLATP00750 562 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 GH1P01241 217 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PDGFRBP09619 1106 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 HOXC6P09630 235 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 ATP1A3P13637 1013 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 CYP2B6P20813 491 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 CTGFP29279 349 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
UBE4B-204ENST00000462658 RGS2P41220 211 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 MTNR1BP49286 362 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 NPEPPSP55786 919 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 NRG3P56975 720 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 BPIFB4P59827 614 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PRKCEQ02156 737 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 SURF1Q15526 300 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 MAN2A1Q16706 1144 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PTPN21Q16825 1174 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 HSDL1Q3SXM5 330 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 TMEM63BQ5T3F8 832 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PLA2G4FQ68DD2 849 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 ANKRD40Q6AI12 368 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 CENPPQ6IPU0 288 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 ANO5Q75V66 913 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 MAEAQ7L5Y9 396 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 SFR1Q86XK3 245 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 GLB1L2Q8IW92 636 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 MYOCDQ8IZQ8 938 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 MYCT1Q8N699 235 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 ANKRD53Q8N9V6 530 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 AFAP1L1Q8TED9 768 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 SOCS4Q8WXH5 440 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 P2RX5Q93086 422 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 FUBP3Q96I24 572 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PDLIM2Q96JY6 352 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 CEP170P1Q96L14 293 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 PCYT2Q99447 389 aa7.98□□□□□ -1.13
UBE4B-204ENST00000462658 GPR20Q99678 358 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms