RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-215	ENST00000461778	PHACTR1	Q9C0D0	580 aa		13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	DHX35	Q9H5Z1	703 aa	Known RBP	13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	CWC15	Q9P013	229 aa	Known RBP	13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	FBXW11	Q9UKB1	542 aa		13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	ADAM28	Q9UKQ2	775 aa		13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-215	ENST00000461778	CFAP69	A5D8W1	941 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	OR6C75	A6NL08	312 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SGK1	O00141	431 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	EFEMP2	O95967	443 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	ATP2A2	P16615	1042 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	ADRA1B	P35368	520 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	MAGEA11	P43364	429 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	HCAR3	P49019	387 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SLC11A1	P49279	550 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	VPS41	P49754	854 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	GPS1	Q13098	491 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SLC29A2	Q14542	456 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	NFE2	Q16621	373 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	CEP85L	Q5SZL2	805 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	CROCCP2	Q86T23	111 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	FAM131B	Q86XD5	332 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	ABI1	Q8IZP0	508 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	OR2W6P	Q8NHA6	318 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	RSAD2	Q8WXG1	361 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	ZBTB9	Q96C00	473 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	ATP6V1G3	Q96LB4	118 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	C8orf48	Q96LL4	319 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	CSPG4P5	Q96PW8	444 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	TRIM62	Q9BVG3	475 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	MRPL9	Q9BYD2	267 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	MAGEB5	Q9BZ81	275 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SLC28A3	Q9HAS3	691 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	TMEM51	Q9NW97	253 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	MARCH5	Q9NX47	278 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	IL37	Q9NZH6	218 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	LRFN2	Q9ULH4	789 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	SHOC2	Q9UQ13	582 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	PCDHA11	Q9Y5I1	949 aa		13.59	□□□□□ -0.23
NR1H3-215	ENST00000461778	GOLGA6C	A6NDK9	693 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	CAPN9	O14815	690 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	TTC4	O95801	387 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	IGLV3-25	P01717	112 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GALT	P07902	379 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GOLGA6D	P0CG33	693 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	FOSL2	P15408	326 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	CXCR3	P49682	368 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	ZNF135	P52742	658 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GYS2	P54840	703 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GDF10	P55107	478 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	ROR1	Q01973	937 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	SEMA3B	Q13214	749 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	VARS2	Q5ST30	1063 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	BSPRY	Q5W0U4	402 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	DENND2C	Q68D51	928 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	DARS2	Q6PI48	645 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	VSTM1	Q6UX27	236 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	HOOK3	Q86VS8	718 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	NAT8L	Q8N9F0	302 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	FAM76A	Q8TAV0	307 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GPR62	Q9BZJ7	368 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	NKX2-4	Q9H2Z4	354 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	FAM204A	Q9H8W3	233 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	PIGV	Q9NUD9	493 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	GOLGA6A	Q9NYA3	693 aa		13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NR1H3-215	ENST00000461778	COL6A3	P12111	3177 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	MYO16	Q9Y6X6	1858 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	HACD1	B0YJ81	288 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778		H3BRJ5	948 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778		H7C0C1	242 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	ALOX15B	O15296	676 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	TCEA3	O75764	348 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	DGKI	O75912	1065 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	BAIAP3	O94812	1187 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	SHBG	P04278	402 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	MYZAP	P0CAP1	466 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	NCAM1	P13591	858 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	AMPD1	P23109	780 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	ARL4A	P40617	200 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	ATP5O	P48047	213 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	GATM	P50440	423 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	SKOR1	P84550	965 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	SMARCB1	Q12824	385 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	SLC10A2	Q12908	348 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	ELAVL2	Q12926	359 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	PAFAH1B3	Q15102	231 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	NCBP2-AS2	Q69YL0	99 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	C1orf228	Q6PIY5	440 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	C4orf22	Q6V702	233 aa		13.57	□□□□□ -0.24
NR1H3-215	ENST00000461778	PPIL6	Q8IXY8	311 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms