RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 GBP1P32455 592 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 EPHB3P54753 998 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 TAS2R40P59535 323 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 C15orf59Q2T9L4 293 aaPredicted RBP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 SND1Q7KZF4 910 aaKnown RBP eCLIP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CTAGE6Q86UF2 777 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CPNE8Q86YQ8 564 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CCDC50Q8IVM0 306 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CTAGE4Q8IX94 777 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 RCOR2Q8IZ40 523 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 GIPC2Q8TF65 315 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 ALG3Q92685 438 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 RBM41Q96IZ5 413 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CARD6Q9BX69 1037 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CRISPLD1Q9H336 500 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 ZWILCHQ9H900 591 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 DNMT3BQ9UBC3 853 aaKnown RBP15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 WNT16Q9UBV4 365 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 CDH7Q9ULB5 785 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 USP18Q9UMW8 372 aa15.81■□□□□ 0.12
TMEM39A-203ENST00000461654 M0QYT0 321 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 PGRMC1O00264 195 aaKnown RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 SEC24AO95486 1093 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 F9P00740 461 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 PDGFBP01127 241 aaPredicted RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 KRT1P04264 644 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 RALAP11233 206 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 MIPP30301 263 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 MARCKSL1P49006 195 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 CLCN5P51795 746 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 VCPP55072 806 aaKnown RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 TUBB4BP68371 445 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 DEUP1Q05D60 604 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 HTR4Q13639 388 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 BOLA3Q53S33 107 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 IER5LQ5T953 404 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 DAB2IPQ5VWQ8 1189 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 TRNP1Q6NT89 227 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 RSRC2Q7L4I2 434 aaKnown RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 ITIH5Q86UX2 942 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 CREG2Q8IUH2 290 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 PDZD8Q8NEN9 1154 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 EXD1Q8NHP7 514 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 ACTRT1Q8TDG2 376 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 GPR152Q8TDT2 470 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 TBCBQ99426 244 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 NPY6RQ99463 290 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 FAM204AQ9H8W3 233 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 TLR8Q9NR97 1041 aaKnown RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 IL37Q9NZH6 218 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 PCSK1NQ9UHG2 260 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 MAGED2Q9UNF1 606 aaPredicted RBP15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 NAALADL1Q9UQQ1 740 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 YIPF1Q9Y548 306 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 ZNF318Q5VUA4 2279 aa15.8■□□□□ 0.12
TMEM39A-203ENST00000461654 TRIOO75962 3097 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 TRUB2O95900 331 aaKnown RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 SRFP11831 508 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 PTPN2P17706 415 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 ATF6P18850 670 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 HOXD11P31277 338 aaPredicted RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 RDXP35241 583 aaKnown RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 NTHL1P78549 312 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 LONRF2Q1L5Z9 754 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 MAP7D3Q8IWC1 876 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 RASGEF1CQ8N431 466 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 ITFG1Q8TB96 612 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 MAIP1Q8WWC4 291 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 RSAD2Q8WXG1 361 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 EDEM1Q92611 657 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 CENPIQ92674 756 aaPredicted RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 FGF13Q92913 245 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 OLA1Q9NTK5 396 aaKnown RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 INSL5Q9Y5Q6 135 aa15.79■□□□□ 0.12
TMEM39A-203ENST00000461654 MYH10P35580 1976 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 SYNJ2BP-COX16A0A087WUM0 186 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 GOLGA6L10A0A0M3HER8 536 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 A0A1W2PQH9 124 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 FAM92AA1XBS5 289 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 FGGP02679 453 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 LRG1P02750 347 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 PYGMP11217 842 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 PTPN5P54829 565 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 COPS2P61201 443 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 USP46P62068 366 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 NHLH1Q02575 133 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 SLC25A11Q02978 314 aaKnown RBP15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 TWF1Q12792 350 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 TAF10Q12962 218 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 NME3Q13232 169 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 ARL13BQ3SXY8 428 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 PABPC1LQ4VXU2 614 aaKnown RBP15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 SH3PXD2AQ5TCZ1 1133 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 SYPL2Q5VXT5 272 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 ASTLQ6HA08 431 aaPredicted RBP15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 BHLHA9Q7RTU4 235 aa15.78■□□□□ 0.12
TMEM39A-203ENST00000461654 TADA2BQ86TJ2 420 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms