RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 ARHGAP26Q9UNA1 814 aa10.16□□□□□ -0.78
C9orf78-203ENST00000461539 TLR6Q9Y2C9 796 aa10.16□□□□□ -0.78
C9orf78-203ENST00000461539 HBS1LQ9Y450 684 aaKnown RBP10.16□□□□□ -0.78
C9orf78-203ENST00000461539 PLXNA4Q9HCM2 1894 aa10.16□□□□□ -0.78
C9orf78-203ENST00000461539 TNRC18O15417 2968 aaPredicted RBP10.16□□□□□ -0.78
C9orf78-203ENST00000461539 GRXCR2A6NFK2 248 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 TCF4P15884 667 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 HARS2P49590 506 aaKnown RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 CXCR3P49682 368 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 KCNQ1P51787 676 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SMAD4Q13485 552 aaKnown RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 PPP2R5DQ14738 602 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SMTNL2Q2TAL5 461 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 BRMS1LQ5PSV4 323 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 NUGGCQ68CJ6 796 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 BNIPLQ7Z465 357 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SLFN11Q7Z7L1 901 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 NT5DC3Q86UY8 548 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 ARID3BQ8IVW6 561 aaPredicted RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 UNC45BQ8IWX7 931 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 RHOT1Q8IXI2 618 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 MAFAQ8NHW3 353 aaPredicted RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SH3RF2Q8TEC5 729 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SUSD6Q92537 303 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 PLD4Q96BZ4 506 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SLC39A13Q96H72 371 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 FCRL2Q96LA5 508 aaPredicted RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 C16orf45Q96MC5 204 aaPredicted RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 PEBP4Q96S96 227 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 MYADMQ96S97 322 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 TKTL2Q9H0I9 626 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 TDP1Q9NUW8 608 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 GPATCH2LQ9NWQ4 482 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 GDE1Q9NZC3 331 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 CFAP97Q9P2B7 532 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 LSM7Q9UK45 103 aaKnown RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 PACSIN2Q9UNF0 486 aaPredicted RBP10.15□□□□□ -0.78
C9orf78-203ENST00000461539 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 MYO7AQ13402 2215 aa10.15□□□□□ -0.78
C9orf78-203ENST00000461539 ESPNB1AK53 854 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 LEFTY2O00292 366 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 MBTPS2O43462 519 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 PSTPIP1O43586 416 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 STC2O76061 302 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 PRAMEF12O95522 483 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 IGLV3-27P01718 113 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 KRT1P04264 644 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 KRT7P08729 469 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 RARAP10276 462 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SP100P23497 879 aaPredicted RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 IL1R2P27930 398 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 CORO1AP31146 461 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ADRA1BP35368 520 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 RING1Q06587 406 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 EIF4EBP2Q13542 120 aaPredicted RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 RPS6KA1Q15418 735 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 BOLA3Q53S33 107 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ODF2Q5BJF6 829 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 KCNT1Q5JUK3 1230 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 FAM78AQ5JUQ0 283 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 LRRC38Q5VT99 294 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 TXNRD3NBQ6F5E7 133 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 POTEHQ6S545 545 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 OTOP3Q7RTS5 596 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 DDX42Q86XP3 938 aaKnown RBP eCLIP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 CCDC185Q8N715 623 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ATP6V0D2Q8N8Y2 350 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ST13P5Q8NFI4 369 aaPredicted RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 HSPH1Q92598 858 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 KRT35Q92764 455 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SMARCD2Q92925 531 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 USP13Q92995 863 aaPredicted RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 WBP2Q969T9 261 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 NTAN1Q96AB6 310 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ACSF2Q96CM8 615 aaPredicted RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 WDR24Q96S15 920 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SNRNP25Q9BV90 132 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 DHX35Q9H5Z1 703 aaKnown RBP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 TMPRSS4Q9NRS4 437 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 KLHL11Q9NVR0 708 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 ARHGEF38Q9NXL2 777 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 DNAI1Q9UI46 699 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 CCL26Q9Y258 94 aa10.14□□□□□ -0.79
C9orf78-203ENST00000461539 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.14□□□□□ -0.79
C9orf78-203ENST00000461539 COL4A4P53420 1690 aaPredicted RBP10.13□□□□□ -0.79
C9orf78-203ENST00000461539 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 KCNU1A8MYU2 1149 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 MIF4GDA9UHW6 222 aaKnown RBP10.13□□□□□ -0.79
C9orf78-203ENST00000461539 ENC1O14682 589 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 PAGE1O75459 146 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 CTNNA2P26232 953 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 CASQ1P31415 396 aa10.13□□□□□ -0.79
C9orf78-203ENST00000461539 CTNNA1P35221 906 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms