RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 ZNF606Q8WXB4 792 aa24.62■■□□□ 1.53
LMBR1-214ENST00000461469 IRGQQ8WZA9 623 aa24.62■■□□□ 1.53
LMBR1-214ENST00000461469 THAP9Q9H5L6 903 aa24.62■■□□□ 1.53
LMBR1-214ENST00000461469 RXFP3Q9NSD7 469 aa24.62■■□□□ 1.53
LMBR1-214ENST00000461469 CACNA1AO00555 2505 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 WASH3PC4AMC7 463 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 LTFP02788 710 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 PNMA6AP0CW24 399 aaPredicted RBP24.61■■□□□ 1.53
LMBR1-214ENST00000461469 CHKAP35790 457 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 SGSHP51688 502 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 LMNB2Q03252 620 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 EXOC3L4Q17RC7 722 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 SCUBE3Q8IX30 993 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 LOXL4Q96JB6 756 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 APEX2Q9UBZ4 518 aa24.61■■□□□ 1.53
LMBR1-214ENST00000461469 HBS1LQ9Y450 684 aaKnown RBP24.61■■□□□ 1.53
LMBR1-214ENST00000461469 GTPBP10A4D1E9 387 aaKnown RBP24.6■■□□□ 1.53
LMBR1-214ENST00000461469 TSPAN3O60637 253 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 IGLV3-27P01718 113 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 GABRG2P18507 467 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 NTSR1P30989 418 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 PLA2G2CQ5R387 149 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 KCNV2Q8TDN2 545 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 SHC3Q92529 594 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 PIWIL1Q96J94 861 aaKnown RBP24.6■■□□□ 1.53
LMBR1-214ENST00000461469 SLC4A5Q9BY07 1137 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 POLMQ9NP87 494 aaPredicted RBP24.6■■□□□ 1.53
LMBR1-214ENST00000461469 SAMSN1Q9NSI8 373 aaKnown RBP24.6■■□□□ 1.53
LMBR1-214ENST00000461469 CACNA2D2Q9NY47 1150 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 MBD1Q9UIS9 605 aaPredicted RBP24.6■■□□□ 1.53
LMBR1-214ENST00000461469 SLC27A6Q9Y2P4 619 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 RAD54BQ9Y620 910 aa24.6■■□□□ 1.53
LMBR1-214ENST00000461469 CEP192Q8TEP8 1941 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 THAP12O43422 761 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 HOXB2P14652 356 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 GNA15P30679 374 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 GBP1P32455 592 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 P2RY2P41231 377 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 ATXN1P54253 815 aaKnown RBP24.59■■□□□ 1.53
LMBR1-214ENST00000461469 PUM1Q14671 1186 aaKnown RBP eCLIP24.59■■□□□ 1.531e-6■□□□□ 8.1
LMBR1-214ENST00000461469 MAN2A1Q16706 1144 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 TPD52L1Q16890 204 aaPredicted RBP24.59■■□□□ 1.53
LMBR1-214ENST00000461469 PREPLQ4J6C6 727 aaPredicted RBP24.59■■□□□ 1.53
LMBR1-214ENST00000461469 USP39Q53GS9 565 aaKnown RBP24.59■■□□□ 1.53
LMBR1-214ENST00000461469 PMS2CLQ68D20 193 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 TMEM215Q68D42 235 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 WDTC1Q8N5D0 677 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 ST7Q9NRC1 585 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 STOML2Q9UJZ1 356 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 NAALADL1Q9UQQ1 740 aa24.59■■□□□ 1.53
LMBR1-214ENST00000461469 MUC22E2RYF6 1773 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-214ENST00000461469 GOLGA6L7A0A1B0GV03 622 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 PAPSS1O43252 624 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-214ENST00000461469 HOXD9P28356 352 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-214ENST00000461469 ERCC5P28715 1186 aaPredicted RBP24.58■■□□□ 1.53
LMBR1-214ENST00000461469 MPLP40238 635 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 USP8P40818 1118 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 KCNMA1Q12791 1236 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 MAP7D1Q3KQU3 841 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 TCEAL6Q6IPX3 200 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 ENOSF1Q7L5Y1 443 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 CHPFQ8IZ52 775 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 TCEAL3Q969E4 200 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 MYEOVQ96EZ4 313 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 GABRG3Q99928 467 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 SLC6A17Q9H1V8 727 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 CD93Q9NPY3 652 aa24.58■■□□□ 1.53
LMBR1-214ENST00000461469 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.57■■□□□ 1.52
LMBR1-214ENST00000461469 PRR5-ARHGAP8B1AHC4 643 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 E5RJQ4 531 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 ALDH1A2O94788 518 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 FBXO21O94952 628 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 SLC6A4P31645 630 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 ARHGAP8P85298 464 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 VWA3BQ502W6 1294 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 SYPL2Q5VXT5 272 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 NADSYN1Q6IA69 706 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 TRMT11Q7Z4G4 463 aaKnown RBP24.57■■□□□ 1.52
LMBR1-214ENST00000461469 DQX1Q8TE96 717 aaKnown RBP24.57■■□□□ 1.52
LMBR1-214ENST00000461469 DDI1Q8WTU0 396 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 SORCS1Q8WY21 1168 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 TUBGCP2Q9BSJ2 902 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 NDST4Q9H3R1 872 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 BCCIPQ9P287 314 aaKnown RBP eCLIP24.57■■□□□ 1.52
LMBR1-214ENST00000461469 DNAJC12Q9UKB3 198 aa24.57■■□□□ 1.52
LMBR1-214ENST00000461469 CKAP5Q14008 2032 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 MED19A0JLT2 244 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-214ENST00000461469 ZNF806P0C7X5 589 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 HARS2P49590 506 aaKnown RBP24.56■■□□□ 1.52
LMBR1-214ENST00000461469 PITX1P78337 314 aaPredicted RBP24.56■■□□□ 1.52
LMBR1-214ENST00000461469 TAF5Q15542 800 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 MEA1Q16626 185 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 FAM133BQ5BKY9 247 aaKnown RBP24.56■■□□□ 1.52
LMBR1-214ENST00000461469 RFWD3Q6PCD5 774 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 NUDT18Q6ZVK8 323 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 DGLUCYQ7Z3D6 616 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 ADAM32Q8TC27 787 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 WFDC5Q8TCV5 224 aa24.56■■□□□ 1.52
LMBR1-214ENST00000461469 IPO4Q8TEX9 1081 aaKnown RBP24.56■■□□□ 1.52
LMBR1-214ENST00000461469 FCRL2Q96LA5 508 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms