RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CBFBQ13951 182 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 GRM4Q14833 912 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 RPS6KA2Q15349 733 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 TBCCQ15814 346 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 TREML2Q5T2D2 321 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 KIAA0895LQ68EN5 471 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 MAVSQ7Z434 540 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 LRRC71Q8N4P6 559 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 USP38Q8NB14 1042 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 SCAMP5Q8TAC9 235 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 ASB10Q8WXI3 467 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 FBXL20Q96IG2 436 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 PPM1MQ96MI6 270 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 KRTAP1-5Q9BYS1 174 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 TAF1DQ9H5J8 278 aaPredicted RBP4.33□□□□□ -1.72
CLK1-206ENST00000461326 WASH6PQ9NQA3 447 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 SNX15Q9NRS6 342 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 LIN7CQ9NUP9 197 aaKnown RBP4.33□□□□□ -1.72
CLK1-206ENST00000461326 FBXO28Q9NVF7 368 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 PI4KBQ9UBF8 816 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 DAPP1Q9UN19 280 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
CLK1-206ENST00000461326 MAST3O60307 1309 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A18PA6NE21 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A16PA6NEW6 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A9PA6NNJ1 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A5PA8MXJ8 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 CTIFO43310 598 aaKnown RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 PMPCBO75439 489 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 RBMXL2O75526 392 aaKnown RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 RPP40O75818 363 aaKnown RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 URI1O94763 535 aaPredicted RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 FESP07332 822 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A15PP0C7V4 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A14PP0C7W9 464 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 GYS1P13807 737 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 ZFXP17010 805 aaPredicted RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 ADRA1DP25100 572 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 SERPINA4P29622 427 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 CLCN2P51788 898 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 HNRNPMP52272 730 aaKnown RBP eCLIP4.32□□□□□ -1.72
CLK1-206ENST00000461326 TXNL4AP83876 142 aaKnown RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 SF3A3Q12874 501 aaKnown RBP eCLIP4.32□□□□□ -1.72
CLK1-206ENST00000461326 MTAPQ13126 283 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 KCNJ12Q14500 433 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 AASDHQ4L235 1098 aaPredicted RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 TMEM196Q5HYL7 178 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 FAM90A2PQ658T7 463 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 CCDC144NLQ6NUI1 221 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 MSANTD2Q6P1R3 559 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 LVRNQ6Q4G3 990 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 ZNF551Q7Z340 670 aaPredicted RBP4.32□□□□□ -1.72
CLK1-206ENST00000461326 KRT27Q7Z3Y8 459 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 ANKS1BQ7Z6G8 1248 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 HERC6Q8IVU3 1022 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 TMEM57Q8N5G2 664 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 SIRT6Q8N6T7 355 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 ZNF366Q8N895 744 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 PNPLA1Q8N8W4 532 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 OR1N1Q8NGS0 311 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 XAGE5Q8WWM1 108 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 HERVK_113Q902F9 699 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 C3orf49Q96BT1 292 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 HAPLN3Q96S86 360 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 BRD8Q9H0E9 1235 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 NOD2Q9HC29 1040 aa4.32□□□□□ -1.72
CLK1-206ENST00000461326 MBD3L5A6NJ08 208 aaPredicted RBP4.31□□□□□ -1.72
CLK1-206ENST00000461326 GCOM1H8Y6P7 765 aaPredicted RBP4.31□□□□□ -1.72
CLK1-206ENST00000461326 SEPT4O43236 478 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 PPP6R2O75170 966 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 RHOP08100 348 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 PDHA1P08559 390 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 XBP1P17861 261 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 DRD1P21728 446 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 MATN1P21941 496 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 PRKAA2P54646 552 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 UBE3AQ05086 875 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 SEMA3BQ13214 749 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 FHL3Q13643 280 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 MAPRE1Q15691 268 aaKnown RBP4.31□□□□□ -1.72
CLK1-206ENST00000461326 TXNRD1Q16881 649 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 LY6KQ17RY6 165 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 P3H1Q32P28 736 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 TBC1D25Q3MII6 688 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 ZNF569Q5MCW4 686 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 MAP3K21Q5TCX8 1036 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 ANKRD16Q6P6B7 361 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 PIK3AP1Q6ZUJ8 805 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 PTCHD4Q6ZW05 846 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 ZNF804AQ7Z570 1209 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 C11orf44Q8N8P7 122 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms