RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PRR5LQ6MZQ0 368 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ANKRD7Q92527 254 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 MYRFQ9Y2G1 1151 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 UBE2QL1A1L167 161 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CLOCKO15516 846 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 KLRC1P26715 233 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 HPCAL1P37235 193 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 MGAT5Q09328 741 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM62Q0P6H9 643 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CSHL1Q14406 222 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 STARD3Q14849 445 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ZC2HC1CQ53FD0 456 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RIPOR1Q6ZS17 1223 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CELF1Q92879 486 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 TUBE1Q9UJT0 475 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 A0A088AWK7 358 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ENO2P09104 434 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 GHRP10912 638 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ACADMP11310 421 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF10P21506 573 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ALDH9A1P49189 494 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CACNA2D1P54289 1103 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 BCAT1P54687 386 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 DMPKQ09013 629 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 PCNX4Q63HM2 1172 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RXFP1Q9HBX9 757 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF112Q9UJU3 913 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 TBX20Q9UMR3 447 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 SIK3Q9Y2K2 1263 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 NDUFAF1Q9Y375 327 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 EFCAB6Q5THR3 1501 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 METP08581 1390 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 H3BN98 237 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 SNUPNO95149 360 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RCVRNP35243 200 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 HK2P52789 917 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 EXOSC10Q01780 885 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 KCNMA1Q12791 1236 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 STK4Q13043 487 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 GRTP1Q5TC63 336 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 GATAD2AQ86YP4 633 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 TMPRSS6Q8IU80 811 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CROCCP3Q8IVE0 287 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 EEF1AKMT1Q8WVE0 214 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 MPP4Q96JB8 637 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 SENP2Q9HC62 589 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 DPP7Q9UHL4 492 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 VPS28Q9UK41 221 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 HS6ST1O60243 411 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CCNT2O60583 730 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 KATNA1O75449 491 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 NDUFB10O96000 172 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 PIK3CGP48736 1102 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RHAGQ02094 409 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 SPIRE1Q08AE8 756 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 LIN54Q6MZP7 749 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 RNF180Q86T96 592 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 MTDHQ86UE4 582 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 PROX1Q92786 737 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ASB2Q96Q27 587 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 SLC9A7Q96T83 725 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 PAIP1Q9H074 479 aaKnown RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 THAP2Q9H0W7 228 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 TCF7L2Q9NQB0 619 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 BTBD7Q9P203 1132 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CRNNQ9UBG3 495 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 ARIH1Q9Y4X5 557 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
BRCA1-205ENST00000461221 CCDC154A6NI56 674 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 PIK3CDO00329 1044 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 GUCY1B2O75343 617 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 PTSQ03393 145 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 FGD3Q5JSP0 725 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 FAM117BQ6P1L5 589 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 DEFB107AQ8IZN7 70 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 GDPD5Q8WTR4 605 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 POLR1BQ9H9Y6 1135 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 NMRAL1Q9HBL8 299 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 A1CFQ9NQ94 594 aaKnown RBP9.21□□□□□ -0.93
BRCA1-205ENST00000461221 OR6B1O95007 311 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 GYPCP04921 128 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 CRABP2P29373 138 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 FAM220AQ7Z4H9 259 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 OR56A4Q8NGH8 313 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 SERAC1Q96JX3 654 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 BBS4Q96RK4 519 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 PI4K2AQ9BTU6 479 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 MMADHCQ9H3L0 296 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-205ENST00000461221 OSGEPL1Q9H4B0 414 aa9.21□□□□□ -0.93
BRCA1-205ENST00000461221 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.94
BRCA1-205ENST00000461221 LSM8O95777 96 aaKnown RBP9.21□□□□□ -0.94
BRCA1-205ENST00000461221 UMPSP11172 480 aa9.21□□□□□ -0.94
BRCA1-205ENST00000461221 ACO1P21399 889 aaKnown RBP9.21□□□□□ -0.94
BRCA1-205ENST00000461221 CD151P48509 253 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms