RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 SCUBE3Q8IX30 993 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 FAM160A2Q8N612 972 aaPredicted RBP13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 IQCDQ96DY2 449 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 HHIPQ96QV1 700 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 SYNCQ9H7C4 482 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 ARHGEF4Q9NR80 690 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 OSER1Q9NX31 292 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 EP300Q09472 2414 aaPredicted RBP13.84□□□□□ -0.19
RAB11FIP3-207ENST00000461009 TBC1D3BA6NDS4 549 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 YJEFN3A6XGL0 299 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 E7ENQ6 273 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 K7EQS6 105 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PIK3R2O00459 728 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZBTB24O43167 697 aaPredicted RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GABBR2O75899 941 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KAT7O95251 611 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LSM8O95777 96 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LTFP02788 710 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IRF1P10914 325 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 FERP16591 822 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DGKEP52429 567 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EFEMP1Q12805 493 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PDCLQ13371 301 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EOGTQ5NDL2 527 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TAF3Q5VWG9 929 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NAIF1Q69YI7 327 aaPredicted RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TRIM72Q6ZMU5 477 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TRMT11Q7Z4G4 463 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NOP9Q86U38 636 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 WDTC1Q8N5D0 677 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZNF397Q8NF99 534 aaPredicted RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EPS8L1Q8TE68 723 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 USP33Q8TEY7 942 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NDRG1Q92597 394 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 XPO6Q96QU8 1125 aaKnown RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 RTKNQ9BST9 563 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DCLK3Q9C098 648 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 POLMQ9NP87 494 aaPredicted RBP13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SEMA4GQ9NTN9 838 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DLL3Q9NYJ7 618 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 IFNKQ9P0W0 207 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DEC1Q9P2X7 70 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZNF510Q9Y2H8 683 aa13.83□□□□□ -0.2
RAB11FIP3-207ENST00000461009 E5RJQ4 531 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CAPN9O14815 690 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MMEP08473 750 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CDH5P33151 784 aaPredicted RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SLC6A11P48066 632 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CDR2Q01850 454 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ARID5AQ03989 594 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 FIGNQ5HY92 759 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 EFHC1Q5JVL4 640 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HTR3DQ70Z44 454 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BEND5Q7L4P6 421 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZDHHC17Q8IUH5 632 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 RNF214Q8ND24 703 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NETO1Q8TDF5 533 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 FAM149B1Q96BN6 582 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 C18orf8Q96DM3 657 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 ZFRQ96KR1 1074 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 CYTH4Q9UIA0 394 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NUDT5Q9UKK9 219 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PCDHGA5Q9Y5G8 931 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 OTOGLQ3ZCN5 2332 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GVINP1Q7Z2Y8 2422 aa13.82□□□□□ -0.2
RAB11FIP3-207ENST00000461009 A0A0A0MRY4 1105 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SLC12A8A0AV02 714 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 HOXC11O43248 304 aaPredicted RBP13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GLI1P08151 1106 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 NCAM1P13591 858 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 GBP1P32455 592 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 TIE1P35590 1138 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 YWHAZP63104 245 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 KDSRQ06136 332 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 BYSLQ13895 437 aaKnown RBP13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 OR6B2Q6IFH4 312 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 SDE2Q6IQ49 451 aa13.81□□□□□ -0.2
RAB11FIP3-207ENST00000461009 PRR23CQ6ZRP0 262 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms