RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 KIAA1549LQ6ZVL6 1849 aa21.48■■□□□ 1.03
RPUSD3-210ENST00000460909 NCAM2O15394 837 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 IRAK2O43187 625 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 HARS2P49590 506 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 TBX4P57082 545 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 GAD2Q05329 585 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 SPECC1LQ69YQ0 1117 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 C12orf40Q86WS4 652 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 CPXM2Q8N436 756 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 EZH1Q92800 747 aaPredicted RBP21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 CD101Q93033 1021 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 NT5C3BQ969T7 300 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 P2RY13Q9BPV8 354 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 C11orf70Q9BRQ4 267 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 LMAN1LQ9HAT1 526 aa21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 LUC7L2Q9Y383 392 aaKnown RBP21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.47■■□□□ 1.03
RPUSD3-210ENST00000460909 GFRA2O00451 464 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 LATS1O95835 1130 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 SKILP12757 684 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 TNFAIP3P21580 790 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 CASP14P31944 242 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 NOS2P35228 1153 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 CHKAP35790 457 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 MATKP42679 507 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 NSFP46459 744 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 SLC6A11P48066 632 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 NUBP1P53384 320 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 GSCP56915 257 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 KLHL30Q0D2K2 578 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 MESP2Q0VG99 397 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 FAM102AQ5T9C2 384 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 OTUD1Q5VV17 481 aaPredicted RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 TRNP1Q6NT89 227 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 MON1BQ7L1V2 547 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 ARCQ7LC44 396 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 UNC45BQ8IWX7 931 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 ETFBKMTQ8IXQ9 262 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 DTWD2Q8NBA8 298 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 AZIN2Q96A70 460 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 ADAM33Q9BZ11 813 aa21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 RBM12Q9NTZ6 932 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 SEPT11Q9NVA2 429 aaKnown RBP21.46■■□□□ 1.03
RPUSD3-210ENST00000460909 GOLGA8SH3BPF8 625 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 FLT3P36888 993 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 EIF2DP41214 584 aaKnown RBP21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 RNASE9P60153 205 aaKnown RBP21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 CDK17Q00537 523 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 ANO4Q32M45 955 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 DGKKQ5KSL6 1271 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 NUGGCQ68CJ6 796 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 ACAD10Q6JQN1 1059 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 TPGS1Q6ZTW0 290 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 PHTF2Q8N3S3 785 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 NPY6RQ99463 290 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 TAS2R14Q9NYV8 317 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 ADAM22Q9P0K1 906 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 CALCOCO1Q9P1Z2 691 aa21.45■■□□□ 1.02
RPUSD3-210ENST00000460909 DDX3XO00571 662 aaKnown RBP eCLIP21.44■■□□□ 1.022e-8■■■□□ 18.5
RPUSD3-210ENST00000460909 EGFP01133 1207 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 PENKP01210 267 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 TFE3P19532 575 aaPredicted RBP21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 DRD1P21728 446 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 MAGEA9P43362 315 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 C1QBPQ07021 282 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 GRSF1Q12849 480 aaKnown RBP eCLIP21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 GAS6Q14393 721 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 ZC3H12AQ5D1E8 599 aaKnown RBP21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 ADGRF1Q5T601 910 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 FYB2Q5VWT5 728 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 PHLDB2Q86SQ0 1253 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 BBS2Q9BXC9 721 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 CHRDQ9H2X0 955 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 WDR35Q9P2L0 1181 aa21.44■■□□□ 1.02
RPUSD3-210ENST00000460909 CACNA1IQ9P0X4 2223 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 A0A0A0MRY4 1105 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 TCRBV5S1A1TA0A578 114 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 NEDD8-MDP1E9PL57 170 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 GALR2O43603 387 aaPredicted RBP21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 CACNG3O60359 315 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 ACSL4O60488 711 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 TYRP14679 529 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 HNRNPH3P31942 346 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 LRRC32Q14392 662 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 ARID5BQ14865 1188 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 FAM133BQ5BKY9 247 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 NADSYN1Q6IA69 706 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 BNIPLQ7Z465 357 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 NAT16Q8N8M0 369 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 EXOC4Q96A65 974 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 PNKPQ96T60 521 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 FAM204AQ9H8W3 233 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 METTL5Q9NRN9 209 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 DDIT4Q9NX09 232 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 RRN3Q9NYV6 651 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 FBXO10Q9UK96 956 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 BZW2Q9Y6E2 419 aaKnown RBP21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 MUC6Q6W4X9 2439 aa21.43■■□□□ 1.02
RPUSD3-210ENST00000460909 KCNU1A8MYU2 1149 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms