RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 PHEXP78562 749 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 GRAMD1BQ3KR37 738 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 NLRP9Q7RTR0 991 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 SZRD1Q7Z422 152 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 CCDC126Q96EE4 140 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 ERBB2P04626 1255 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 CAPRIN1Q14444 709 aaKnown RBP18.18■□□□□ 0.5
CHRD-208ENST00000460627 SLC24A5Q71RS6 500 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 ZNF473Q8WTR7 871 aaKnown RBP18.18■□□□□ 0.5
CHRD-208ENST00000460627 DCDC2Q9UHG0 476 aa18.18■□□□□ 0.5
CHRD-208ENST00000460627 SMIM28A0A1B0GU29 152 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 FGF10O15520 208 aaPredicted RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 ENPEPQ07075 957 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 MPP3Q13368 585 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 ZNF284Q2VY69 593 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 ZCWPW2Q504Y3 356 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 C9orf57Q5W0N0 161 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 FAM124BQ9H5Z6 455 aaPredicted RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 NPHS2Q9NP85 383 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 THG1LQ9NWX6 298 aaKnown RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 SRP72O76094 671 aaKnown RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 SELPP16109 830 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 KCNA10Q16322 511 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 HS6ST3Q8IZP7 471 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 LGI2Q8N0V4 545 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 ARMC2Q8NEN0 867 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 HIPK3Q9H422 1215 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 CNGB3Q9NQW8 809 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 MTO1Q9Y2Z2 717 aaKnown RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 RGPD1P0DJD0 1748 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 LZTS3O60299 673 aaPredicted RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 STMN1P16949 149 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 SH3BGRP55822 239 aaPredicted RBP18.17■□□□□ 0.5
CHRD-208ENST00000460627 POLNQ7Z5Q5 900 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 TTC30BQ8N4P2 665 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 FIBCD1Q8N539 461 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 PAFAH2Q99487 392 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 MANSC1Q9H8J5 431 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 XPNPEP1Q9NQW7 623 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 STOML1Q9UBI4 398 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 DNPEPQ9ULA0 475 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 ARHGDIAP52565 204 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 LENG9Q96B70 501 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
CHRD-208ENST00000460627 RNF103O00237 685 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 HECTD3Q5T447 861 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 KRT80Q6KB66 452 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 MYLPFQ96A32 169 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 FRMD3A2A2Y4 597 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 KCNK1O00180 336 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 ANGPT2O15123 496 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 KLHL2O95198 593 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 EIF1ADQ8N9N8 165 aaKnown RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 EPS8L3Q8TE67 593 aaKnown RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 FAM161BQ96MY7 647 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 LHX5Q9H2C1 402 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 TRIM45Q9H8W5 580 aaPredicted RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 MARCOQ9UEW3 520 aaPredicted RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 PADI3Q9ULW8 664 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 PHF20L1A8MW92 1017 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 M0R2N6 131 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 ENDOD1O94919 500 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 NPY2RP49146 381 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 SMARCB1Q12824 385 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 CLPBQ9H078 707 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 SYTL2Q9HCH5 934 aa18.16■□□□□ 0.5
CHRD-208ENST00000460627 SETD1AO15047 1707 aaKnown RBP18.16■□□□□ 0.5
CHRD-208ENST00000460627 IRAK1P51617 712 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 LRRC43Q8N309 656 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 ASPSCR1Q9BZE9 553 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 RIC8BQ9NVN3 520 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 OR12D3Q9UGF7 316 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 MOXD2PA6NHM9 499 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHRD-208ENST00000460627 SEMA4DQ92854 862 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 KREMEN1Q96MU8 473 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 PDZD7Q9H5P4 517 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 ECT2Q9H8V3 914 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 IARS2Q9NSE4 1012 aaKnown RBP18.15■□□□□ 0.5
CHRD-208ENST00000460627 RAB21Q9UL25 225 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 ERI2A8K979 691 aaKnown RBP18.15■□□□□ 0.5
CHRD-208ENST00000460627 TSPAN1O60635 241 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 CDK16Q00536 496 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 HSP90AA5PQ58FG0 334 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 NUP93Q8N1F7 819 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 IKZF4Q9H2S9 585 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 SEPT3Q9UH03 358 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
CHRD-208ENST00000460627 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.15■□□□□ 0.5
CHRD-208ENST00000460627 CNTNAP1P78357 1384 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
CHRD-208ENST00000460627 GLP2RO95838 553 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 CHI3L2Q15782 390 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 KDM7AQ6ZMT4 941 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 ARL8AQ96BM9 186 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 LRRC39Q96DD0 335 aa18.15■□□□□ 0.5
CHRD-208ENST00000460627 FAM111AQ96PZ2 611 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms