RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 DNASE1L3Q13609 305 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 CBFBQ13951 182 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 MFSD13AQ14CX5 517 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 PCSK4Q6UW60 755 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 BCDIN3DQ7Z5W3 292 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 SLC44A2Q8IWA5 706 aaPredicted RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 GALNT15Q8N3T1 639 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 BOLLQ8N9W6 283 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 TBC1D20Q96BZ9 403 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 REXO5Q96IC2 774 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 BBC3Q96PG8 261 aaPredicted RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 TRAPPC9Q96Q05 1148 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 SNX18Q96RF0 628 aa5.42□□□□□ -1.54
VBP1-202ENST00000460509 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 TAF1DQ9H5J8 278 aaPredicted RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 ALG13Q9NP73 1137 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 POLR2AP24928 1970 aaKnown RBP5.42□□□□□ -1.54
VBP1-202ENST00000460509 CCDC187A0A096LP49 1063 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 M0QYT0 321 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 CLIC1O00299 241 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 MT-CO3P00414 261 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 C1RP00736 705 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 IGLV2-14P01704 120 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 SLC3A2P08195 630 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 APEHP13798 732 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 WT1P19544 449 aaPredicted RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 JAK3P52333 1124 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 CFHR3Q02985 330 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 COL10A1Q03692 680 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 SF3A3Q12874 501 aaKnown RBP eCLIP5.41□□□□□ -1.54
VBP1-202ENST00000460509 KCNB1Q14721 858 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 CC2D1BQ5T0F9 858 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 SUMO4Q6EEV6 95 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 FBXO42Q6P3S6 717 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 LDHAL6AQ6ZMR3 332 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 DCDC5Q6ZRR9 648 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 RAB11FIP2Q7L804 512 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 TRABD2AQ86V40 505 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 C16orf71Q8IYS4 520 aaPredicted RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 PNLDC1Q8NA58 520 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 MYRIPQ8NFW9 859 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 STT3BQ8TCJ2 826 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 OTUD7AQ8TE49 926 aaPredicted RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 SARAFQ96BY9 339 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 EDC3Q96F86 508 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 MECRQ9BV79 373 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 TMEM120AQ9BXJ8 343 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 ADGRE3Q9BY15 652 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 SEPSECSQ9HD40 501 aaKnown RBP5.41□□□□□ -1.54
VBP1-202ENST00000460509 SEMA4GQ9NTN9 838 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 RAB21Q9UL25 225 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 SPATA31A6Q5VVP1 1343 aa5.41□□□□□ -1.54
VBP1-202ENST00000460509 EFCAB8A8MWE9 144 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 M0QZQ0 153 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 KRT38O76015 456 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 DHRS4L1P0CG22 281 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 VEGFAP15692 232 aaPredicted RBP5.4□□□□□ -1.54
VBP1-202ENST00000460509 FOXO1Q12778 655 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 FAM187BQ17R55 369 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ANKRD45Q5TZF3 282 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ACSM6Q6P461 480 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 NFRKBQ6P4R8 1299 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 C16orf89Q6UX73 402 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ZNF354CQ86Y25 554 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 CSGALNACT1Q8TDX6 532 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ADAMTS18Q8TE60 1221 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 GOLGA1Q92805 767 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 REPS1Q96D71 796 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 FAR2Q96K12 515 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 FYTTD1Q96QD9 318 aaKnown RBP5.4□□□□□ -1.54
VBP1-202ENST00000460509 VPS16Q9H269 839 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 PRDM8Q9NQV8 689 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ITM2CQ9NQX7 267 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ABHD10Q9NUJ1 306 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ASIC5Q9NY37 505 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 ARPP21Q9UBL0 812 aaPredicted RBP5.4□□□□□ -1.54
VBP1-202ENST00000460509 NFU1Q9UMS0 254 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 DAPP1Q9UN19 280 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 CNTN6Q9UQ52 1028 aa5.4□□□□□ -1.54
VBP1-202ENST00000460509 UBE2J1Q9Y385 318 aaPredicted RBP5.4□□□□□ -1.54
VBP1-202ENST00000460509 HEMK1Q9Y5R4 338 aaPredicted RBP5.4□□□□□ -1.54
VBP1-202ENST00000460509 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 UBE2Q2LH0YL09 131 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 IRAK2O43187 625 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 VPS41P49754 854 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 PNLIPRP1P54315 467 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 ELLP55199 621 aaPredicted RBP5.39□□□□□ -1.55
VBP1-202ENST00000460509 WDR5P61964 334 aaKnown RBP5.39□□□□□ -1.55
VBP1-202ENST00000460509 BIRC3Q13489 604 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 CNGA3Q16281 694 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 CERKLQ49MI3 558 aaPredicted RBP5.39□□□□□ -1.55
VBP1-202ENST00000460509 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 VSTM1Q6UX27 236 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 SYNE3Q6ZMZ3 975 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 RFX8Q6ZV50 586 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 CPXCR1Q8N123 301 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 OR52L2PQ8NGH6 319 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 CPT1BQ92523 772 aa5.39□□□□□ -1.55
VBP1-202ENST00000460509 RSC1A1Q92681 617 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms