RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 LRRC38Q5VT99 294 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 WDR93Q6P2C0 686 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 TMEM53Q6P2H8 277 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 NECAB2Q7Z6G3 386 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 LILRB1Q8NHL6 650 aaPredicted RBP10.77□□□□□ -0.69
HERC4-207ENST00000460168 EXD1Q8NHP7 514 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 CLEC4CQ8WTT0 213 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 RXFP2Q8WXD0 754 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 MYLPFQ96A32 169 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 CNPY3Q9BT09 278 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 EBF2Q9HAK2 575 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 PCMTD2Q9NV79 361 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
HERC4-207ENST00000460168 XPO7Q9UIA9 1087 aaKnown RBP10.77□□□□□ -0.69
HERC4-207ENST00000460168 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 RAB21Q9UL25 225 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 PCDHB8Q9UN66 801 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 NR2E1Q9Y466 385 aa10.77□□□□□ -0.69
HERC4-207ENST00000460168 NRP1O14786 923 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SMIM24O75264 130 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 GABBR2O75899 941 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 HEXIM1O94992 359 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 KRT1P04264 644 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 ALDH2P05091 517 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SDC4P31431 198 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 RPL34P49207 117 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 BCAR1P56945 870 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 ATP11AP98196 1134 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 MAPRE1Q15691 268 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 PPP2R5EQ16537 467 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SMTNL2Q2TAL5 461 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 CNKSR3Q6P9H4 555 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SLC26A9Q7LBE3 791 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 POLNQ7Z5Q5 900 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 OR10T2Q8NGX3 314 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 FAM149B1Q96BN6 582 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 CFAP57Q96MR6 1250 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 KCNK16Q96T55 309 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 AMACRQ9UHK6 382 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SH3GLB1Q9Y371 365 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 MICAL3Q7RTP6 2002 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 A0A0B4J203 849 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 TCRBV7S2A1N4TA0A589 114 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 PI4K2BG5E9Z4 385 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 RAD51CO43502 376 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 KRT7P08729 469 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 RALAP11233 206 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 TCF3P15923 654 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SLC25A11Q02978 314 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 IFFO1Q0D2I5 559 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 C15orf59Q2T9L4 293 aaPredicted RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 CFAP157Q5JU67 520 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 TXNRD3NBQ6F5E7 133 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 FIP1L1Q6UN15 594 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.76□□□□□ -0.69
HERC4-207ENST00000460168 MAATS1Q7Z4T9 603 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 RCOR2Q8IZ40 523 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 CRIPAKQ8N1N5 446 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 LRRC43Q8N309 656 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 GDAP1Q8TB36 358 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 MAIP1Q8WWC4 291 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 ACSF2Q96CM8 615 aaPredicted RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 TMEM209Q96SK2 561 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 CGREF1Q99674 301 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 HEMGNQ9BXL5 484 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 SLITRK6Q9H5Y7 841 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 DDX56Q9NY93 547 aaKnown RBP10.76□□□□□ -0.69
HERC4-207ENST00000460168 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 USP18Q9UMW8 372 aa10.76□□□□□ -0.69
HERC4-207ENST00000460168 LRRD1A4D1F6 860 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 HTR3EA5X5Y0 456 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 BTF3P20290 206 aaKnown RBP10.75□□□□□ -0.69
HERC4-207ENST00000460168 FUT4P22083 530 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 MIPP30301 263 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 RFC2P35250 354 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 TKTL1P51854 596 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 GSTM4Q03013 218 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 ZBTB17Q13105 803 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 KCNT1Q5JUK3 1230 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 EFHC1Q5JVL4 640 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 SH3PXD2AQ5TCZ1 1133 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 FAM171A1Q5VUB5 890 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 FAM171BQ6P995 826 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 LURAP1LQ8IV03 231 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 ARFGAP1Q8N6T3 406 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 LINC00469Q8N7U9 141 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.75□□□□□ -0.69
HERC4-207ENST00000460168 KCTD13Q8WZ19 329 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 RUBCNQ92622 972 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 MAGOHBQ96A72 148 aaKnown RBP10.75□□□□□ -0.69
HERC4-207ENST00000460168 SMOQ99835 787 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 RHOBTB2Q9BYZ6 727 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 ZCWPW1Q9H0M4 648 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 ZNF148Q9UQR1 794 aa10.75□□□□□ -0.69
HERC4-207ENST00000460168 ASB3Q9Y575 518 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms