RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PES1O00541 588 aaKnown RBP16.81■□□□□ 0.28
COL7A1-203ENST00000459756 MSI1O43347 362 aaKnown RBP16.81■□□□□ 0.28
COL7A1-203ENST00000459756 IGLV3-27P01718 113 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 TGM1P22735 817 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 PDCLQ13371 301 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 USP39Q53GS9 565 aaKnown RBP16.81■□□□□ 0.28
COL7A1-203ENST00000459756 ADGRF1Q5T601 910 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 NUGGCQ68CJ6 796 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 BEND5Q7L4P6 421 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 TMEM110Q86TL2 294 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 KBTBD6Q86V97 674 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 C11orf74Q86VG3 221 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 UNC45BQ8IWX7 931 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 MDGA1Q8NFP4 955 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 DDI1Q8WTU0 396 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 FAM149B1Q96BN6 582 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 P2RY11Q96G91 374 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 SLC2A11Q9BYW1 496 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 ZDHHC4Q9NPG8 344 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 CYTH4Q9UIA0 394 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 AJAP1Q9UKB5 411 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-203ENST00000459756 PCDHGC3Q9UN70 934 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 DCHS1Q96JQ0 3298 aa16.81■□□□□ 0.28
COL7A1-203ENST00000459756 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 E5RJQ4 531 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 NCAM1P13591 858 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 HNRNPLP14866 589 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL7A1-203ENST00000459756 NTSR1P30989 418 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 LMNB2Q03252 620 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 RING1Q06587 406 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 SPEM2Q0P670 501 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 SDE2Q6IQ49 451 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 DPY19L2P1Q6NXN4 242 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 NOX5Q96PH1 765 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 IRX2Q9BZI1 471 aaPredicted RBP16.8■□□□□ 0.28
COL7A1-203ENST00000459756 LHX5Q9H2C1 402 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 ANO10Q9NW15 660 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 HCN2Q9UL51 889 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
COL7A1-203ENST00000459756 FOXN3O00409 490 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-203ENST00000459756 PAPSS1O43252 624 aaPredicted RBP16.79■□□□□ 0.28
COL7A1-203ENST00000459756 FYNP06241 537 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 ID4P47928 161 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 SLC11A2P49281 568 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 TBX4P57082 545 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 BPIFB4P59827 614 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 KCNMA1Q12791 1236 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 NNTQ13423 1086 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 ELF2Q15723 593 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 STX1AQ16623 288 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 PLK5Q496M5 336 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 KLHDC7AQ5VTJ3 777 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 CDKAL1Q5VV42 579 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 FAM71AQ8IYT1 594 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 DQX1Q8TE96 717 aaKnown RBP16.79■□□□□ 0.28
COL7A1-203ENST00000459756 AZIN2Q96A70 460 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 SERPINB11Q96P15 392 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 TPSD1Q9BZJ3 242 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 PARD6AQ9NPB6 346 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 TLR6Q9Y2C9 796 aa16.79■□□□□ 0.28
COL7A1-203ENST00000459756 TCRBV21S2A2A0A5A6 115 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 GFRA2O00451 464 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 CAPN9O14815 690 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 FOXD2O60548 495 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 RHOBTB1O94844 696 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 EPN2O95208 641 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 TPM2P07951 284 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 HOXB2P14652 356 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 CLCN1P35523 988 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 KRT9P35527 623 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 SNX16P57768 344 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 YWHAZP63104 245 aaKnown RBP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 RAPGEF1Q13905 1077 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 E2F5Q15329 346 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 CSRP2Q16527 193 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 ANKS1BQ7Z6G8 1248 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 SLC47A2Q86VL8 602 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 WDTC1Q8N5D0 677 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 OLIG1Q8TAK6 271 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 HMGB4Q8WW32 186 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 PIWIL1Q96J94 861 aaKnown RBP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 GABRG3Q99928 467 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 DUSP15Q9H1R2 295 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 TAB2Q9NYJ8 693 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL7A1-203ENST00000459756 NAALADL1Q9UQQ1 740 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
COL7A1-203ENST00000459756 RALGAPA1Q6GYQ0 2036 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms