RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.65
HDLBP-227ENST00000458564 PCDHB9Q9Y5E1 797 aa10.96□□□□□ -0.65
HDLBP-227ENST00000458564 METTL12A8MUP2 240 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 KCNJ18B7U540 433 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 DKK1O94907 266 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 CER1O95813 267 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 MYL1P05976 194 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 RALAP11233 206 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 MAOBP27338 520 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 ME1P48163 572 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 COPAP53621 1224 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 NFIL3Q16649 462 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 KMT5BQ4FZB7 885 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 IL27RAQ6UWB1 636 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 DBX2Q6ZNG2 339 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 TMPRSS6Q8IU80 811 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 FAM217AQ8IXS0 508 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 GRAMD1CQ8IYS0 662 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 ZCCHC9Q8N567 271 aaKnown RBP10.95□□□□□ -0.66
HDLBP-227ENST00000458564 C1orf216Q8TAB5 229 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 BAHD1Q8TBE0 780 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-227ENST00000458564 JAKMIP2Q96AA8 810 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 ERLEC1Q96DZ1 483 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 SIPA1Q96FS4 1042 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 FAXDC2Q96IV6 333 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 GPR174Q9BXC1 333 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 DUSP16Q9BY84 665 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 SLC2A11Q9BYW1 496 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 FOXD4L1Q9NU39 408 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 KIAA1522Q9P206 1035 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-227ENST00000458564 APOBEC2Q9Y235 224 aaKnown RBP10.95□□□□□ -0.66
HDLBP-227ENST00000458564 PCDHGB2Q9Y5G2 931 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 CKAP5Q14008 2032 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 MYH10P35580 1976 aa10.95□□□□□ -0.66
HDLBP-227ENST00000458564 BCAT2O15382 392 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 SYNCRIPO60506 623 aaKnown RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 CORO1AP31146 461 aaKnown RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 VAMP7P51809 220 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 MCCD1P59942 119 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 BNC1Q01954 994 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 ZNF234Q14588 700 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 DCAF12L1Q5VU92 463 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 CEP135Q66GS9 1140 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 INTS8Q75QN2 995 aaKnown RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 ARHGAP18Q8N392 663 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 TAS1R2Q8TE23 839 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 PRCCQ92733 491 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 PAGE5Q96GU1 130 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 NUP58Q9BVL2 599 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 ELOVL2Q9NXB9 296 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 DKK4Q9UBT3 224 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
HDLBP-227ENST00000458564 IGSF10Q6WRI0 2623 aa10.94□□□□□ -0.66
HDLBP-227ENST00000458564 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 FLRT2O43155 660 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 TIMM44O43615 452 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 CALUO43852 315 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 KIF20AO95235 890 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 F13A1P00488 732 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 CYBBP04839 570 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 ZSCAN22P10073 491 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PRKCHP24723 683 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 MATKP42679 507 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PPP3CAQ08209 521 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PDE4CQ08493 712 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 EFEMP1Q12805 493 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 CAMK2GQ13555 558 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 RAB41Q5JT25 222 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 TMEM215Q68D42 235 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 SLCO6A1Q86UG4 719 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 TTC39CQ8N584 583 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PNPLA1Q8N8W4 532 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 PLD4Q96BZ4 506 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 CCDC86Q9H6F5 360 aaKnown RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 GAREM1Q9H706 876 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 IL21RQ9HBE5 538 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 OSGEPQ9NPF4 335 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 TM7SF3Q9NS93 570 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 TOR4AQ9NXH8 423 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 MARCH2Q9P0N8 246 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 USP25Q9UHP3 1055 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 RASAL2Q9UJF2 1139 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 STRIP2Q9ULQ0 834 aa10.93□□□□□ -0.66
HDLBP-227ENST00000458564 FNDC3AQ9Y2H6 1198 aaKnown RBP10.93□□□□□ -0.66
HDLBP-227ENST00000458564 KNL1Q8NG31 2342 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 TRIM49P0CI25 452 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 TRIM49CP0CI26 452 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 ACADMP11310 421 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CD58P19256 250 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 NR2F2P24468 414 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 HOXD9P28356 352 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-227ENST00000458564 GTF2H1P32780 548 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 GCLMP48507 274 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 AFF3P51826 1226 aaKnown RBP10.92□□□□□ -0.66
HDLBP-227ENST00000458564 ZNF445P59923 1031 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms