RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 STK32AQ8WU08 396 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 TRIM62Q9BVG3 475 aa16.92■□□□□ 0.3
CPSF6-203ENST00000456847 TCRBV21S2A2A0A5A6 115 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 TSPAN3O60637 253 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
CPSF6-203ENST00000456847 HOXB2P14652 356 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 GBP1P32455 592 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 TBX4P57082 545 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 PDCLQ13371 301 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 C11orf57Q6ZUT1 292 aaPredicted RBP16.91■□□□□ 0.3
CPSF6-203ENST00000456847 CHPFQ8IZ52 775 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 PGBD3Q8N328 593 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 MDGA1Q8NFP4 955 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 SLC4A5Q9BY07 1137 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 CYTH4Q9UIA0 394 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 CEP83Q9Y592 693 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 FHOD1Q9Y613 1164 aa16.91■□□□□ 0.3
CPSF6-203ENST00000456847 ADAM23O75077 832 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 LATS1O95835 1130 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.36e-8■■■□□ 16.3
CPSF6-203ENST00000456847 NTSR1P30989 418 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 KRT9P35527 623 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 RPL34P49207 117 aaKnown RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 ELF2Q15723 593 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 MPPE1Q53F39 396 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 USP39Q53GS9 565 aaKnown RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 NUGGCQ68CJ6 796 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 RASSF3Q86WH2 238 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 UNC45BQ8IWX7 931 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 FAM217AQ8IXS0 508 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 DQX1Q8TE96 717 aaKnown RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 HMGB4Q8WW32 186 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 SERPINB11Q96P15 392 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 NOX5Q96PH1 765 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 VPS16Q9H269 839 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 PDCL3Q9H2J4 239 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 INVSQ9Y283 1065 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 STARD13Q9Y3M8 1113 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 PRRT4C9JH25 899 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 FOXN3O00409 490 aaPredicted RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 PAPSS1O43252 624 aaPredicted RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 CISD3P0C7P0 127 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 SLC11A2P49281 568 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 ZNF445P59923 1031 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 SLC47A2Q86VL8 602 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 C1orf131Q8NDD1 294 aaKnown RBP16.9■□□□□ 0.3
CPSF6-203ENST00000456847 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 P2RY11Q96G91 374 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 PCDHGC3Q9UN70 934 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 NAALADL1Q9UQQ1 740 aa16.9■□□□□ 0.3
CPSF6-203ENST00000456847 DMDP11532 3685 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 DCLK1O15075 740 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 ZBTB24O43167 697 aaPredicted RBP16.89■□□□□ 0.29
CPSF6-203ENST00000456847 ID4P47928 161 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 BPIFB4P59827 614 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 KRT31Q15323 416 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 FKBP15Q5T1M5 1219 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 ADGRF1Q5T601 910 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 KLHDC7AQ5VTJ3 777 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 SMYD5Q6GMV2 418 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 ANKS1BQ7Z6G8 1248 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 TMEM110Q86TL2 294 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 ADAM32Q8TC27 787 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 UCMAQ8WVF2 138 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 PPP1R13BQ96KQ4 1090 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 SYNCQ9H7C4 482 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 PARD6AQ9NPB6 346 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 FBXO10Q9UK96 956 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 SLC27A6Q9Y2P4 619 aa16.89■□□□□ 0.29
CPSF6-203ENST00000456847 EP300Q09472 2414 aaPredicted RBP16.89■□□□□ 0.29
CPSF6-203ENST00000456847 LRP3O75074 770 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 RHOBTB1O94844 696 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 IGLV3-27P01718 113 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 CLCN1P35523 988 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 MYL5Q02045 173 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 RING1Q06587 406 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 TAC4Q86UU9 113 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 C11orf74Q86VG3 221 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
CPSF6-203ENST00000456847 ERLEC1Q96DZ1 483 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 SPACA7Q96KW9 195 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 ACOX2Q99424 681 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 POPDC2Q9HBU9 364 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 FANCLQ9NW38 375 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 TJP2Q9UDY2 1190 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 GVINP1Q7Z2Y8 2422 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 GPR179Q6PRD1 2367 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 THADAQ6YHU6 1953 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 EPN2O95208 641 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 FYNP06241 537 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 SNX16P57768 344 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 LMNB2Q03252 620 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 GEN1Q17RS7 908 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 PLK5Q496M5 336 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
CPSF6-203ENST00000456847 TMA16Q96EY4 203 aaKnown RBP16.88■□□□□ 0.29
CPSF6-203ENST00000456847 LOXL4Q96JB6 756 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms