RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 NUGGCQ68CJ6 796 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 CC2D1AQ6P1N0 951 aaPredicted RBP18.6■□□□□ 0.57
FAM239A-203ENST00000456563 STRADAQ7RTN6 431 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 RNF135Q8IUD6 432 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 UNC45BQ8IWX7 931 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 YAF2Q8IY57 180 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 CENPIQ92674 756 aaPredicted RBP18.6■□□□□ 0.57
FAM239A-203ENST00000456563 CNPY3Q9BT09 278 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 CD320Q9NPF0 282 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 CALCOCO1Q9P1Z2 691 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 TBC1D14Q9P2M4 693 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 ZNF510Q9Y2H8 683 aa18.6■□□□□ 0.57
FAM239A-203ENST00000456563 REXO2Q9Y3B8 237 aaKnown RBP18.6■□□□□ 0.57
FAM239A-203ENST00000456563 HELZP42694 1942 aaKnown RBP18.6■□□□□ 0.57
FAM239A-203ENST00000456563 SLC9A3R1O14745 358 aaPredicted RBP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 SLC34A2O95436 690 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 KLKB1P03952 638 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 HARS2P49590 506 aaKnown RBP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 KRT83P78385 493 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 DEUP1Q05D60 604 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 CCDC173Q0VFZ6 552 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 NME3Q13232 169 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 TCEAL1Q15170 157 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 C15orf59Q2T9L4 293 aaPredicted RBP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 Q6ZNB5 142 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 RHOT2Q8IXI1 618 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 TTC16Q8NEE8 873 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 OSCP1Q8WVF1 389 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 AZIN2Q96A70 460 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 OTUB2Q96DC9 234 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 NECAB3Q96P71 396 aaPredicted RBP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 PPP1R9BQ96SB3 815 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 UHRF1Q96T88 793 aaPredicted RBP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 FAM83CQ9BQN1 747 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 TRIM7Q9C029 511 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.59■□□□□ 0.57
FAM239A-203ENST00000456563 SORCS3Q9UPU3 1222 aa18.59■□□□□ 0.57
FAM239A-203ENST00000456563 LATS1O95835 1130 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 SLC2A3P11169 496 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 DESP17661 470 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 CORO1AP31146 461 aaKnown RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 GDI1P31150 447 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 CCR1P32246 355 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 RDXP35241 583 aaKnown RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 CXCR3P49682 368 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 ATP11AP98196 1134 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 PPP2R5DQ14738 602 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 PDGFRLQ15198 375 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 ZC3H12AQ5D1E8 599 aaKnown RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 SND1Q7KZF4 910 aaKnown RBP eCLIP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 ACRBPQ8NEB7 543 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 ZNF564Q8TBZ8 553 aaPredicted RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 RFFLQ8WZ73 363 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 PIGVQ9NUD9 493 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 DUS2Q9NX74 493 aaKnown RBP18.58■□□□□ 0.56
FAM239A-203ENST00000456563 CTTNBP2NLQ9P2B4 639 aa18.58■□□□□ 0.56
FAM239A-203ENST00000456563 SYNJ2BP-COX16A0A087WUM0 186 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 KCNU1A8MYU2 1149 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 ARNTLO00327 626 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 CCP110O43303 1012 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 MTA2O94776 668 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 APOEP02649 317 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 PSMA2P25787 234 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 IFNAR2P48551 515 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 VAV2P52735 878 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 ZNF252P-AS1Q0IIN9 211 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 MTA1Q13330 715 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 ACAP1Q15027 740 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 CDO1Q16878 200 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 BRMS1LQ5PSV4 323 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 SH3PXD2AQ5TCZ1 1133 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 DENND1CQ8IV53 801 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 BBS7Q8IWZ6 715 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 FAM172AQ8WUF8 416 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 IRF7Q92985 503 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 ASIC4Q96FT7 647 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 LINC00597Q9H2U6 94 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 BRD9Q9H8M2 597 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 TRPV5Q9NQA5 729 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 SLC2A4RGQ9NR83 387 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 COX16Q9P0S2 106 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 ANAPC7Q9UJX3 599 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 STOML2Q9UJZ1 356 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 AGO1Q9UL18 857 aaKnown RBP18.57■□□□□ 0.56
FAM239A-203ENST00000456563 DUSP12Q9UNI6 340 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 WNT6Q9Y6F9 365 aa18.57■□□□□ 0.56
FAM239A-203ENST00000456563 A0A0A6YYK5 440 aaPredicted RBP18.56■□□□□ 0.56
FAM239A-203ENST00000456563 MYO1FO00160 1098 aa18.56■□□□□ 0.56
FAM239A-203ENST00000456563 SCAMP3O14828 347 aaKnown RBP18.56■□□□□ 0.56
FAM239A-203ENST00000456563 SRFP11831 508 aa18.56■□□□□ 0.56
FAM239A-203ENST00000456563 ATXN1P54253 815 aaKnown RBP18.56■□□□□ 0.56
FAM239A-203ENST00000456563 HDAC4P56524 1084 aa18.56■□□□□ 0.56
FAM239A-203ENST00000456563 EML3Q32P44 896 aa18.56■□□□□ 0.56
FAM239A-203ENST00000456563 FAM217AQ8IXS0 508 aa18.56■□□□□ 0.56
FAM239A-203ENST00000456563 ADGRG2Q8IZP9 1017 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms