RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 AMPD1P23109 780 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 TKTP29401 623 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 MATKP42679 507 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 FKBP1BP68106 108 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 UNC5AQ6ZN44 842 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 NLRP9Q7RTR0 991 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 LRMDAQ9H2I8 198 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 NPHS2Q9NP85 383 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 DTLQ9NZJ0 730 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 PCNTO95613 3336 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 XPO1O14980 1071 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 SNRPAP09012 282 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 WARSP23381 471 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 PSEN2P49810 448 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 IRF5Q13568 498 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 SEMA5AQ13591 1074 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 SV2CQ496J9 727 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 HOMEZQ8IX15 550 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 CTAGE3PQ8IX95 158 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 OLFM3Q96PB7 478 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 FAM111AQ96PZ2 611 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 HNRNPABQ99729 332 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 EBNA1BP2Q99848 306 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 GOLGA2P5Q9HBQ8 144 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 ALG13Q9NP73 1137 aaKnown RBP19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 FZD10Q9ULW2 581 aa19.01■□□□□ 0.63
SEMA3B-209ENST00000456560 TREHO43280 583 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 TROVE2P10155 538 aaKnown RBP eCLIP19■□□□□ 0.63
SEMA3B-209ENST00000456560 OLFML2BQ68BL8 750 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 DEFB106AQ8N104 65 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 PYROXD2Q8N2H3 581 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 SMG8Q8ND04 991 aaKnown RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 RFWD2Q8NHY2 731 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 UTP4Q969X6 686 aaKnown RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 DNAI2Q9GZS0 605 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 BATF3Q9NR55 127 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 RCOR3Q9P2K3 495 aaPredicted RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 MFHAS1Q9Y4C4 1052 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 KRT37O76014 449 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 NEBLO76041 1014 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 IL1BP01584 269 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 GOT1P17174 413 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 PRKD1Q15139 912 aaPredicted RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 PARP6Q2NL67 630 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 SLC25A52Q3SY17 297 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 MORN1Q5T089 497 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 OTUD1Q5VV17 481 aaPredicted RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 SPRYD7Q5W111 196 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 BNIPLQ7Z465 357 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 TLK2Q86UE8 772 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 PIGZQ86VD9 579 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 PSTKQ8IV42 348 aaKnown RBP19■□□□□ 0.63
SEMA3B-209ENST00000456560 ADGRF2Q8IZF7 708 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 TOP6BLQ8N6T0 577 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 APBB2Q92870 758 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 TNIP3Q96KP6 325 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 DUSP16Q9BY84 665 aa19■□□□□ 0.63
SEMA3B-209ENST00000456560 FAM159BA6NKW6 160 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 HACD1B0YJ81 288 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 HUS1O60921 280 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 DAB1O75553 588 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 TGDSO95455 350 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 ZNF865P0CJ78 1059 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 CCNFP41002 786 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 LILRA4P59901 499 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 MPP5Q8N3R9 675 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 CCDC33Q8N5R6 958 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 GSDMBQ8TAX9 411 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 NDRG1Q92597 394 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 INPP5DQ92835 1189 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 LENG1Q96BZ8 264 aaPredicted RBP18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 SRPK1Q96SB4 655 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 TSSK1BQ9BXA7 367 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 PRDM16Q9HAZ2 1276 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 XAB2Q9HCS7 855 aaKnown RBP18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 IPPQ9Y573 584 aa18.99■□□□□ 0.63
SEMA3B-209ENST00000456560 COPEO14579 308 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 UGT1A9O60656 530 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 RFPL1O75677 317 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 CHRM1P11229 460 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 VAV1P15498 845 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TARSP26639 723 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 GRIA1P42261 906 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 SERPINB4P48594 390 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 OVGP1Q12889 678 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 LGSNQ5TDP6 509 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 HEATR6Q6AI08 1181 aaKnown RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 CDHR3Q6ZTQ4 885 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 B3GALNT2Q8NCR0 500 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 HTR3CQ8WXA8 447 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 NT5C3BQ969T7 300 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 SLC7A6OSQ96CW6 309 aaPredicted RBP18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 ZNF570Q96NI8 536 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 TMEM237Q96Q45 408 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 UGT1A7Q9HAW7 530 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 UGT1A10Q9HAW8 530 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 UGT1A8Q9HAW9 530 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 MKS1Q9NXB0 559 aa18.98■□□□□ 0.63
SEMA3B-209ENST00000456560 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms