RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TCAF2A6NFQ2 919 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMD12O00232 456 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 HTR1AP08908 422 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PIK3R1P27986 724 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ACOT2P49753 483 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MKRN3Q13064 507 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PMS2P3Q13401 168 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SLC15A2Q16348 729 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DPY19L1Q2PZI1 675 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SEZ6Q53EL9 994 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 KRT25Q7Z3Z0 450 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CDAN1Q8IWY9 1227 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DEPDC4Q8N2C3 294 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 BEND7Q8N7W2 519 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF280CQ8ND82 737 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM81BQ96LP2 452 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RAB3IPQ96QF0 476 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 EYA3Q99504 573 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ARPC5LQ9BPX5 153 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 NSRP1Q9H0G5 558 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RNPEPQ9H4A4 650 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ITM2CQ9NQX7 267 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 OLFML3Q9NRN5 406 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 AASSQ9UDR5 926 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FBXO10Q9UK96 956 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZBTB21Q9ULJ3 1066 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TMA7Q9Y2S6 64 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM149AA5PLN7 773 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 AGRPO00253 132 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MEN1O00255 615 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SBK3P0C264 359 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CALM1P0DP23 149 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CALM2P0DP24 149 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CALM3P0DP25 149 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TNFAIP3P21580 790 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 IL4RP24394 825 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ALDH7A1P49419 539 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZBTB16Q05516 673 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 IKBKEQ14164 716 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 STAT4Q14765 748 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MGAT5BQ3V5L5 792 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CC2D2BQ6DHV5 1058 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF280DQ6N043 979 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DSG4Q86SJ6 1040 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RHPN2Q8IUC4 686 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CLIP4Q8N3C7 705 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 EMC1Q8N766 993 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF713Q8N859 430 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 C11orf70Q9BRQ4 267 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 VCX3BQ9H321 246 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MAGEF1Q9HAY2 307 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 VCX3AQ9NNX9 186 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 POLE4Q9NR33 117 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RIC8BQ9NVN3 520 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RRN3Q9NYV6 651 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 COQ6Q9Y2Z9 468 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 HBS1LQ9Y450 684 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 EVPLQ92817 2033 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 KIF13BQ9NQT8 1826 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RBBP6Q7Z6E9 1792 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SOBPA7XYQ1 873 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MIF4GDA9UHW6 222 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIM49D1C9J1S8 452 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 C9JVG2 144 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TOR1BO14657 336 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TRPA1O75762 1119 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ZWINTO95229 277 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CST3P01034 146 aaPredicted RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CHRNGP07510 517 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ACO1P21399 889 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 GNA11P29992 359 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 BCAP31P51572 246 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 RPL10AP62906 217 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 SFSWAPQ12872 951 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP1R8Q12972 351 aaKnown RBP4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 PICALMQ13492 652 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP1A4Q13733 1029 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CEP128Q6ZU80 1094 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 GPR180Q86V85 440 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MCOLN2Q8IZK6 566 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 OFCC1Q8IZS5 231 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 IL31RAQ8NI17 732 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 JOSD2Q8TAC2 188 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 OSBPL11Q9BXB4 747 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CEP44Q9C0F1 390 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 COQ10BQ9H8M1 238 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 CD209Q9NNX6 404 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DNAJC28Q9NX36 388 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM216Q9P0N5 145 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 ARHGAP28Q9P2N2 729 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 MED12Q93074 2177 aa4.7□□□□□ -1.66
DEPDC1-202ENST00000456315 DOCK5Q9H7D0 1870 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 A0A0U1RQS6 177 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIM64CA6NLI5 447 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM233B4DJY2 109 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 SULT1C4O75897 302 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 GABBR2O75899 941 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 ARP10275 920 aa4.69□□□□□ -1.66
DEPDC1-202ENST00000456315 PLS3P13797 630 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms