RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 USP18Q9UMW8 372 aa17.26■□□□□ 0.35
CCDC90B-202ENST00000455220 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 SYNJ2BP-COX16A0A087WUM0 186 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 SLC12A8A0AV02 714 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 ZNF500O60304 480 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 MBL2P11226 248 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 IL1R2P27930 398 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 WEE1P30291 646 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 CTNNA1P35221 906 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 TBX4P57082 545 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 ETF1P62495 437 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 COG7P83436 770 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 HADHQ16836 314 aaKnown RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 BRMS1LQ5PSV4 323 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 SND1Q7KZF4 910 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 POLNQ7Z5Q5 900 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 FAM131BQ86XD5 332 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 NPAS3Q8IXF0 933 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 CMTM8Q8IZV2 173 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 SUSD6Q92537 303 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 NTAN1Q96AB6 310 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 WDR24Q96S15 920 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 UBE2ZQ9H832 354 aaPredicted RBP17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 ARHGEF38Q9NXL2 777 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 COX16Q9P0S2 106 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 CD207Q9UJ71 328 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 JRKLQ9Y4A0 524 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 DOCK8Q8NF50 2099 aa17.25■□□□□ 0.35
CCDC90B-202ENST00000455220 KCNU1A8MYU2 1149 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 MIF4GDA9UHW6 222 aaKnown RBP17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 PSTPIP1O43586 416 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 TUBB4AP04350 444 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CKMP06732 381 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CTNNA2P26232 953 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CCR1P32246 355 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 AIF1P55008 147 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 SCAPQ12770 1279 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CCDC85BQ15834 202 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 RHOT1Q8IXI2 618 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 ING5Q8WYH8 240 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 C16orf45Q96MC5 204 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 NECTIN4Q96NY8 510 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 PCSK1NQ9UHG2 260 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CPQQ9Y646 472 aa17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 NUP210Q8TEM1 1887 aaPredicted RBP17.24■□□□□ 0.35
CCDC90B-202ENST00000455220 CCDC66A2RUB6 948 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 I6L893 689 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 FANCGO15287 622 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 SLC2A3P11169 496 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ZXDBP98169 803 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 BOLA3Q53S33 107 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ZC3H12AQ5D1E8 599 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 TXNRD3NBQ6F5E7 133 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 PSTKQ8IV42 348 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 CCDC185Q8N715 623 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ADAMTS19Q8TE59 1207 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 TEKT4Q8WW24 435 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 KRT35Q92764 455 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 FGF13Q92913 245 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ZSWIM3Q96MP5 696 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 TLR10Q9BXR5 811 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 SLITRK6Q9H5Y7 841 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 WDCPQ9H6R7 721 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ANLNQ9NQW6 1124 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 GDE1Q9NZC3 331 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 PACSIN2Q9UNF0 486 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 PCDHA3Q9Y5H8 950 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 KIF2AO00139 706 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 DDX3YO15523 660 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 STC2O76061 302 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 KRT7P08729 469 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 TCF3P15923 654 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 ADRA1BP35368 520 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 AVPR1AP37288 418 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 SSR1P43307 286 aaKnown RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 PEX5P50542 639 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 CLUL1Q15846 466 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 TKTL2Q9H0I9 626 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 POMKQ9H5K3 350 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 GKN1Q9NS71 199 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 FZD10Q9ULW2 581 aa17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
CCDC90B-202ENST00000455220 C5orf42Q9H799 3197 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 PRUNE2Q8WUY3 3088 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 GREM1O60565 184 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 APOEP02649 317 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 RARAP10276 462 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 KCNA5P22460 613 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 MARCKSL1P49006 195 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 KCNQ1P51787 676 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 MTA1Q13330 715 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms