RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 EPB41P11171 864 aaKnown RBP16.81■□□□□ 0.28
GPC1-206ENST00000455111 PRKCHP24723 683 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 COPAP53621 1224 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 LRMPQ12912 555 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 TRIP4Q15650 581 aaPredicted RBP16.81■□□□□ 0.28
GPC1-206ENST00000455111 ISM2Q6H9L7 571 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 UBA3Q8TBC4 463 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 MARCH2Q9P0N8 246 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 SFMBT1Q9UHJ3 866 aa16.81■□□□□ 0.28
GPC1-206ENST00000455111 NYNRINQ9P2P1 1898 aaKnown RBP16.8■□□□□ 0.28
GPC1-206ENST00000455111 XPO1O14980 1071 aaKnown RBP16.8■□□□□ 0.28
GPC1-206ENST00000455111 ZBED1O96006 694 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 RALAP11233 206 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 MAOBP27338 520 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 GOLGA8FQ08AF8 430 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 GOLGA8DPQ0D2H9 430 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 ADIGQ0VDE8 80 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 FOXC1Q12948 553 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 SEMA3BQ13214 749 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 TCERG1LQ5VWI1 586 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 DAB2IPQ5VWQ8 1189 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 CPXM2Q8N436 756 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 CLEC4CQ8WTT0 213 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 EDEM1Q92611 657 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 ZNF419Q96HQ0 510 aaPredicted RBP16.8■□□□□ 0.28
GPC1-206ENST00000455111 HSPA12BQ96MM6 686 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
GPC1-206ENST00000455111 SLCO1B1Q9Y6L6 691 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 TMEM131Q92545 1883 aa16.8■□□□□ 0.28
GPC1-206ENST00000455111 AP5Z1O43299 807 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 MSI1O43347 362 aaKnown RBP16.79■□□□□ 0.28
GPC1-206ENST00000455111 GJB3O75712 270 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 CEACAM1P13688 526 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 HOXD9P28356 352 aaPredicted RBP16.79■□□□□ 0.28
GPC1-206ENST00000455111 COG7P83436 770 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
GPC1-206ENST00000455111 ZNF234Q14588 700 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 PREPLQ4J6C6 727 aaPredicted RBP16.79■□□□□ 0.28
GPC1-206ENST00000455111 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 MYEOVQ96EZ4 313 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 STOML2Q9UJZ1 356 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 MAN1B1Q9UKM7 699 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 PCNX2A6NKB5 2137 aa16.79■□□□□ 0.28
GPC1-206ENST00000455111 ZZEF1O43149 2961 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 SPAARA0A1B0GVQ0 90 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 PIK3R2O00459 728 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 TSPAN3O60637 253 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 SERPINF2P08697 491 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 CD59P13987 128 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 HLA-FP30511 346 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 FMO5P49326 533 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 BCAT1P54687 386 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 DAOAP59103 153 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 BNC1Q01954 994 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 LMAN2Q12907 356 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 BYSLQ13895 437 aaKnown RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 DUOXA1Q1HG43 343 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 BSPRYQ5W0U4 402 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 PMF1Q6P1K2 205 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 SLC36A4Q6YBV0 504 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 ARHGEF19Q8IW93 802 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 SLC35F5Q8WV83 523 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 NUSAP1Q9BXS6 441 aaKnown RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 FAM124BQ9H5Z6 455 aaPredicted RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 ITM2CQ9NQX7 267 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 WSB2Q9NYS7 404 aaPredicted RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 RALYQ9UKM9 306 aaKnown RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 SLC6A14Q9UN76 642 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 ZNF510Q9Y2H8 683 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 TP53BP1Q12888 1972 aaPredicted RBP16.78■□□□□ 0.28
GPC1-206ENST00000455111 NUMA1Q14980 2115 aa16.78■□□□□ 0.28
GPC1-206ENST00000455111 GOLGA6L7A0A1B0GV03 622 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 PPP1R3GB7ZBB8 358 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 STX10O60499 249 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 CFIP05156 583 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 FYNP06241 537 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 VDRP11473 427 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 HLA-EP13747 358 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 HOXD12P35452 270 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 CHKAP35790 457 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 RGS7P49802 495 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
GPC1-206ENST00000455111 SGO2Q562F6 1265 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 TTI2Q6NXR4 508 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 KIAA1324Q6UXG2 1013 aaKnown RBP16.77■□□□□ 0.28
GPC1-206ENST00000455111 NUDT18Q6ZVK8 323 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
GPC1-206ENST00000455111 TADA2BQ86TJ2 420 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 METTL3Q86U44 580 aaKnown RBP16.77■□□□□ 0.28
GPC1-206ENST00000455111 TTC39CQ8N584 583 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 MINDY1Q8N5J2 469 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 GATA6Q92908 595 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 PLD4Q96BZ4 506 aa16.77■□□□□ 0.28
GPC1-206ENST00000455111 LMLNQ96KR4 655 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms