RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 EXOC4Q96A65 974 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 PGM2Q96G03 612 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 IGSF21Q96ID5 467 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 OLFM3Q96PB7 478 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 TRIM51Q9BSJ1 452 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 WDCPQ9H6R7 721 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 CWH43Q9H720 699 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 CATSPERBQ9H7T0 1116 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 RC3H2Q9HBD1 1191 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 WDR6Q9NNW5 1121 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 HAUS2Q9NVX0 235 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 UXTQ9UBK9 157 aaPredicted RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 TRHDEQ9UKU6 1024 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 LZTS1Q9Y250 596 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 R3HDM2Q9Y2K5 976 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 SNX24Q9Y343 169 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 HBS1LQ9Y450 684 aaKnown RBP7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 ASB3Q9Y575 518 aa7.09□□□□□ -1.28
ECHDC1-210ENST00000454859 YJEFN3A6XGL0 299 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 E7ENQ6 273 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 E7ESA3 106 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PI4K2BG5E9Z4 385 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 SGK1O00141 431 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 IRAK2O43187 625 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 ZMYND10O75800 440 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 LATS1O95835 1130 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 ZDHHC11BP0C7U3 371 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 MYZAPP0CAP1 466 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 NCAM1P13591 858 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 KRT10P13645 584 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 TCF4P15884 667 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 ATP2A2P16615 1042 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 TPSB2P20231 275 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 YWHAQP27348 245 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC5A3P53794 718 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 STAT4Q14765 748 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 TPSAB1Q15661 275 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 CCDC142Q17RM4 750 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC39A12Q504Y0 691 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 RNASEH2BQ5TBB1 312 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 KAZNQ674X7 775 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 CYS1Q717R9 158 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 CENPUQ71F23 418 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 ADAT2Q7Z6V5 191 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 LRRTM3Q86VH5 581 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 TMEM130Q8N3G9 435 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PQLC3Q8N755 202 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PCDH19Q8TAB3 1148 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PIWIL1Q96J94 861 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 SERPINB12Q96P63 405 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 TSGA13Q96PP4 275 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 KLC2Q9H0B6 622 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 MTIF3Q9H2K0 278 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 DHX35Q9H5Z1 703 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 FAM204AQ9H8W3 233 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PRDM10Q9NQV6 1147 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 MTMR10Q9NXD2 777 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 SPG21Q9NZD8 308 aa7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 PPARGC1AQ9UBK2 798 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 FARP1Q9Y4F1 1045 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-210ENST00000454859 H0YGN5 161 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 EEF2KO00418 725 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ALOX15BO15296 676 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ABLIM3O94929 683 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TTC4O95801 387 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 USP17L7P0C7H9 530 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 GJC1P36383 396 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ITGA8P53708 1063 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ARL4CP56559 192 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 SNX1Q13596 522 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 RAB33AQ14088 237 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TAF5Q15542 800 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 OTUD1Q5VV17 481 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 IZUMO3Q5VZ72 239 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 PSRC1Q6PGN9 363 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DARS2Q6PI48 645 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DENND5BQ6ZUT9 1274 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 RFX8Q6ZV50 586 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TDRPQ86YL5 185 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC39A11Q8N1S5 342 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KIAA1958Q8N8K9 716 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC7A14Q8TBB6 771 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TFB1MQ8WVM0 346 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KCTD15Q96SI1 283 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 HERPUD2Q9BSE4 406 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 NAT9Q9BTE0 207 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DPH5Q9H2P9 285 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 XAB2Q9HCS7 855 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DDIT4Q9NX09 232 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 CWC15Q9P013 229 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DNAJB4Q9UDY4 337 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 ZMYM5Q9UJ78 669 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 TIMM13Q9Y5L4 95 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 NFS1Q9Y697 457 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 KIAA1671Q9BY89 1806 aa7.07□□□□□ -1.28
ECHDC1-210ENST00000454859 DOCK4Q8N1I0 1966 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms