RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 FOXQ1Q9C009 403 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 LTB4R2Q9NPC1 389 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 SPHK2Q9NRA0 654 aa29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.15■■■□□ 2.265e-13■□□□□ 8.7
SMARCC1-203ENST00000454240 MRPS17Q9Y2R5 130 aaKnown RBP29.15■■■□□ 2.26
SMARCC1-203ENST00000454240 PLEKP08567 350 aaPredicted RBP29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 NUGGCQ68CJ6 796 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 ASTLQ6HA08 431 aaPredicted RBP29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 WDR59Q6PJI9 974 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 TMEM25Q86YD3 366 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 UNC45BQ8IWX7 931 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 FAM217AQ8IXS0 508 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 MCOLN2Q8IZK6 566 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 PJA1Q8NG27 643 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 NT5C3BQ969T7 300 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 VCPIP1Q96JH7 1222 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 OSBPL6Q9BZF3 934 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 RRN3Q9NYV6 651 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 ARHGAP20Q9P2F6 1191 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 STOML2Q9UJZ1 356 aa29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 MTF2Q9Y483 593 aaPredicted RBP29.14■■■□□ 2.26
SMARCC1-203ENST00000454240 KMT2EQ8IZD2 1858 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 MFAP3LO75121 409 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 LATS1O95835 1130 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 ADH1CP00326 375 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 AOC1P19801 751 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 PHLDB2Q86SQ0 1253 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 AZIN2Q96A70 460 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 NPY6RQ99463 290 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 METTL5Q9NRN9 209 aaKnown RBP29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 SIT1Q9Y3P8 196 aa29.13■■■□□ 2.25
SMARCC1-203ENST00000454240 TCRBV5S1A1TA0A578 114 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 FAM170BA6NMN3 283 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 TMCO5BA8MYB1 307 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 PI15O43692 258 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 ADH5P11766 374 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 TARSP26639 723 aaKnown RBP29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 GBP1P32455 592 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 CHKAP35790 457 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 FLT3P36888 993 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 ADKP55263 362 aaKnown RBP29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 UBXN2BQ14CS0 331 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 TRNP1Q6NT89 227 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 SUGP1Q8IWZ8 645 aaKnown RBP29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 CPXM2Q8N436 756 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 C3orf20Q8ND61 904 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 ABHD10Q9NUJ1 306 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 ADAMTS1Q9UHI8 967 aa29.12■■■□□ 2.25
SMARCC1-203ENST00000454240 TRDMT1O14717 391 aaKnown RBP29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 HOXC11O43248 304 aaPredicted RBP29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 RTN2O75298 545 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 GAD2Q05329 585 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 FZD5Q13467 585 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 OTUD1Q5VV17 481 aaPredicted RBP29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 VPS36Q86VN1 386 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 ADAM33Q9BZ11 813 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 ISCUQ9H1K1 167 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 FAM204AQ9H8W3 233 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 DDIT4Q9NX09 232 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 MARK1Q9P0L2 795 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 CALCOCO1Q9P1Z2 691 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 STAP1Q9ULZ2 295 aa29.11■■■□□ 2.25
SMARCC1-203ENST00000454240 KIAA1549LQ6ZVL6 1849 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 M0QYT0 321 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 FTLP02792 175 aaPredicted RBP29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 OPRD1P41143 372 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 GALK1P51570 392 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 PON2Q15165 354 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 SLC25A52Q3SY17 297 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 CNGA4Q8IV77 575 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 CCDC105Q8IYK2 499 aa29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 PGAP3Q96FM1 320 aaPredicted RBP29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 NDRG2Q9UN36 371 aaKnown RBP29.1■■■□□ 2.25
SMARCC1-203ENST00000454240 ZDBF2Q9HCK1 2354 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 SIGLEC16A6NMB1 481 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 AKR1B15C9JRZ8 316 aaPredicted RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 KRT3P12035 628 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 TFE3P19532 575 aaPredicted RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 RRM1P23921 792 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 AVPR2P30518 371 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 TSR1Q2NL82 804 aaKnown RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 ZC3H12AQ5D1E8 599 aaKnown RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 TMEM196Q5HYL7 178 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 ADGRF1Q5T601 910 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 NAIF1Q69YI7 327 aaPredicted RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 TPGS1Q6ZTW0 290 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 BNIPLQ7Z465 357 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 DNAAF5Q86Y56 855 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 EMC1Q8N766 993 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 TMEM105Q8N8V8 129 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 JOSD2Q8TAC2 188 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 P2RY13Q9BPV8 354 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 SELENOOQ9BVL4 669 aa29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 FBRSL1Q9HCM7 1045 aaKnown RBP29.09■■■□□ 2.25
SMARCC1-203ENST00000454240 A0A087X0T9 212 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 GFRA2O00451 464 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 ACSL4O60488 711 aa29.08■■■□□ 2.25
SMARCC1-203ENST00000454240 GJB6O95452 261 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms