RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 DHFR2Q86XF0 187 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 CLVS1Q8IUQ0 354 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 CCDC33Q8N5R6 958 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 COLGALT1Q8NBJ5 622 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SPIRE2Q8WWL2 714 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 VPS33AQ96AX1 596 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 TMEM176AQ96HP8 235 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PLEKHA8Q96JA3 519 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
SEC16A-207ENST00000453963 GPR63Q9BZJ6 419 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 RAD54BQ9Y620 910 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 EPHB6O15197 1021 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PROCP04070 461 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PGK2P07205 417 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MYL4P12829 197 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 TTKP33981 857 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 BCAT1P54687 386 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 SLC12A3P55017 1021 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 FCGRTP55899 365 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PLEKHH3Q7Z736 793 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PRELID2Q8N945 189 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 PHF21AQ96BD5 680 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 ABHD8Q96I13 439 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 BDH2Q9BUT1 245 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 COMMD3-BMI1R4GMX3 469 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
SEC16A-207ENST00000453963 MEI4A8MW99 385 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SLITRK3O94933 977 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 NPTXRO95502 500 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 OR1G1P47890 313 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 RARRES1P49788 294 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ACAP1Q15027 740 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 KCNK18Q7Z418 384 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CYP4F12Q9HCS2 524 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 APOC4-APOC2K7ER74 178 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 RNF103O00237 685 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 LZTS3O60299 673 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 APOC2P02655 101 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SLC2A3P11169 496 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CYP2F1P24903 491 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CHN2P52757 468 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ATP6AP1LQ52LC2 224 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 TIGD7Q6NT04 549 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 EXOC3L1Q86VI1 746 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CDRT15Q96T59 188 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SYTL2Q9HCH5 934 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 VANGL2Q9ULK5 521 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 PPP2R3BQ9Y5P8 575 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 PRR23D1E9PI22 279 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SHOX2O60902 331 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 PRR23D2P0DMB1 279 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 PGAM1P18669 254 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ILF2Q12905 390 aaKnown RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ZCCHC7Q8N3Z6 543 aaKnown RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SNX31Q8N9S9 440 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 DIS3LQ8TF46 1054 aaKnown RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 RMND5AQ9H871 391 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 GPAMQ9HCL2 828 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 DCXO43602 365 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ARIH2O95376 493 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SGO1Q5FBB7 561 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ZNF484Q5JVG2 852 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 MARK2Q7KZI7 788 aaKnown RBP12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 SNX32Q86XE0 403 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CPNE1Q99829 537 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 ITGB1BP2Q9UKP3 347 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 CLCA2Q9UQC9 943 aa12.35□□□□□ -0.43
SEC16A-207ENST00000453963 RIMS1Q86UR5 1692 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 STX7O15400 261 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 VPS26AO75436 327 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 ATP6V1B2P21281 511 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 CDC25CP30307 473 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 CLCN3P51790 818 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 C21orf59P57076 290 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 NCALDP61601 193 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 LACTB2Q53H82 288 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 ZRANB3Q5FWF4 1079 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
SEC16A-207ENST00000453963 SAMD4BQ5PRF9 694 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 PIWIL2Q8TC59 973 aaKnown RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 H2AFY2Q9P0M6 372 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
SEC16A-207ENST00000453963 CAB39Q9Y376 341 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms