RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 CYP1A1P04798 512 aaPredicted RBP15.29■□□□□ 0.04
VPS16-205ENST00000453689 FYNP06241 537 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 TNFAIP3P21580 790 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 DRD1P21728 446 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 CORO1AP31146 461 aaKnown RBP15.29■□□□□ 0.04
VPS16-205ENST00000453689 GSDMDP57764 484 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 NOMO3P69849 1222 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 GAD2Q05329 585 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 C12orf40Q86WS4 652 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 TMEM25Q86YD3 366 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 OLIG1Q8TAK6 271 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
VPS16-205ENST00000453689 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 FAM149B1Q96BN6 582 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 PLD4Q96BZ4 506 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 PPP1R13BQ96KQ4 1090 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 DCLK3Q9C098 648 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 SEPT11Q9NVA2 429 aaKnown RBP15.29■□□□□ 0.04
VPS16-205ENST00000453689 FAM86C1Q9NVL1 165 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 ARHGAP20Q9P2F6 1191 aa15.29■□□□□ 0.04
VPS16-205ENST00000453689 HBS1LQ9Y450 684 aaKnown RBP15.29■□□□□ 0.04
VPS16-205ENST00000453689 SSU72P8A0A1W2PR75 194 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 MSI1O43347 362 aaKnown RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 PLEKP08567 350 aaPredicted RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 NCAM1P13591 858 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 PLA2G5P39877 138 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 EIF2DP41214 584 aaKnown RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 SLC6A11P48066 632 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 CDK17Q00537 523 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 TRIP4Q15650 581 aaPredicted RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 CLEC16AQ2KHT3 1053 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 PTPN20Q4JDL3 420 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 NAA35Q5VZE5 725 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 MSANTD4Q8NCY6 345 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 ATOH1Q92858 354 aaPredicted RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 FAM122AQ96E09 287 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 PIWIL1Q96J94 861 aaKnown RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 PCDHB18PQ96TA0 734 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 PRMT8Q9NR22 394 aaPredicted RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 FBXO4Q9UKT5 387 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 AGO1Q9UL18 857 aaKnown RBP15.28■□□□□ 0.04
VPS16-205ENST00000453689 ZNF510Q9Y2H8 683 aa15.28■□□□□ 0.04
VPS16-205ENST00000453689 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.042e-10■■■□□ 18.2
VPS16-205ENST00000453689 RNF40O75150 1001 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 ERBB2P04626 1255 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 SP9P0CG40 484 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 UNGP13051 313 aaPredicted RBP15.27■□□□□ 0.04
VPS16-205ENST00000453689 SNX16P57768 344 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 CENPCQ03188 943 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 MESP2Q0VG99 397 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 MAPK8IP2Q13387 824 aaPredicted RBP15.27■□□□□ 0.04
VPS16-205ENST00000453689 ANO4Q32M45 955 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 PKN3Q6P5Z2 889 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 TPGS1Q6ZTW0 290 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 FAM183BPQ6ZVS7 135 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 BEND5Q7L4P6 421 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 DENND1CQ8IV53 801 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 ETFBKMTQ8IXQ9 262 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 SPEM1Q8N4L4 309 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 NAT16Q8N8M0 369 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 IPO4Q8TEX9 1081 aaKnown RBP15.27■□□□□ 0.04
VPS16-205ENST00000453689 PHOX2BQ99453 314 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 DEF6Q9H4E7 631 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 POPDC2Q9HBU9 364 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 MARK1Q9P0L2 795 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 NAALADL1Q9UQQ1 740 aa15.27■□□□□ 0.04
VPS16-205ENST00000453689 NEDD8-MDP1E9PL57 170 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 IGLV3-27P01718 113 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 FECHP22830 423 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 EIF4A3P38919 411 aaKnown RBP15.26■□□□□ 0.03
VPS16-205ENST00000453689 NSFP46459 744 aaKnown RBP15.26■□□□□ 0.03
VPS16-205ENST00000453689 CCR3P51677 355 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 SATB1Q01826 763 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
VPS16-205ENST00000453689 KDSRQ06136 332 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 TAF5Q15542 800 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 SYPL2Q5VXT5 272 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 OR6B2Q6IFH4 312 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 TSSK4Q6SA08 328 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 FAM217AQ8IXS0 508 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 PHTF2Q8N3S3 785 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 DQX1Q8TE96 717 aaKnown RBP15.26■□□□□ 0.03
VPS16-205ENST00000453689 P2RY11Q96G91 374 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 PNKPQ96T60 521 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 CHP1Q99653 195 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.26■□□□□ 0.03
VPS16-205ENST00000453689 TRIM62Q9BVG3 475 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 BBS2Q9BXC9 721 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 ADAMTS1Q9UHI8 967 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 CACNA1HO95180 2353 aa15.26■□□□□ 0.03
VPS16-205ENST00000453689 DOCK4Q8N1I0 1966 aa15.25■□□□□ 0.03
VPS16-205ENST00000453689 FAM170AA1A519 330 aa15.25■□□□□ 0.03
VPS16-205ENST00000453689 ANTXRLA6NF34 631 aa15.25■□□□□ 0.03
VPS16-205ENST00000453689 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms