RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 FLT3P36888 993 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 CCR3P51677 355 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 GSCP56915 257 aaPredicted RBP16.36■□□□□ 0.21
VCX3B-204ENST00000453306 RPL7AP62424 266 aaKnown RBP16.36■□□□□ 0.21
VCX3B-204ENST00000453306 OGDHQ02218 1023 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 FZD5Q13467 585 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 MAMLD1Q13495 774 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 PLEKHA7Q6IQ23 1121 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 DEFB106AQ8N104 65 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 ZNF276Q8N554 614 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 EMC1Q8N766 993 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 PDZD8Q8NEN9 1154 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
VCX3B-204ENST00000453306 MRPS31Q92665 395 aaKnown RBP16.36■□□□□ 0.21
VCX3B-204ENST00000453306 VCPIP1Q96JH7 1222 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 SYNCQ9H7C4 482 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 TRPC7Q9HCX4 862 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 GKN1Q9NS71 199 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 EHD2Q9NZN4 543 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 GMEB2Q9UKD1 530 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 GREB1Q4ZG55 1949 aa16.36■□□□□ 0.21
VCX3B-204ENST00000453306 COL4A3Q01955 1670 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 HEPACAM2A8MVW5 462 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 PRR5-ARHGAP8B1AHC4 643 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 EIF3CLB5ME19 914 aaKnown RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 TLR5O60602 858 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 NDUFA10O95299 355 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 HDCP19113 662 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 ABCB4P21439 1286 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 SCNN1AP37088 669 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 VIPR2P41587 438 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 PPP3CCP48454 512 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 RNASE9P60153 205 aaKnown RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 YWHAZP63104 245 aaKnown RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 ARHGAP8P85298 464 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 EIF4EBP2Q13542 120 aaPredicted RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 TSSK4Q6SA08 328 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 VPS36Q86VN1 386 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 CMTM8Q8IZV2 173 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 ACRBPQ8NEB7 543 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 EIF3CQ99613 913 aaKnown RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 DEF6Q9H4E7 631 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 LMAN1LQ9HAT1 526 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 METTL5Q9NRN9 209 aaKnown RBP16.35■□□□□ 0.21
VCX3B-204ENST00000453306 ASNSD1Q9NWL6 643 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 SFMBT1Q9UHJ3 866 aa16.35■□□□□ 0.21
VCX3B-204ENST00000453306 SIGLEC16A6NMB1 481 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CHADO15335 359 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 GREM1O60565 184 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CYP1A2P05177 515 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CALB1P05937 261 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 GLI1P08151 1106 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 TUBP50607 506 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 LMNB2Q03252 620 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 LRRC32Q14392 662 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 RSPO4Q2I0M5 234 aaPredicted RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ARHGAP15Q53QZ3 475 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 EFHC1Q5JVL4 640 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 FAM102AQ5T9C2 384 aaPredicted RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 SH3PXD2AQ5TCZ1 1133 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 BTBD8Q5XKL5 378 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 MSANTD2Q6P1R3 559 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 TOGARAM2Q6ZUX3 1019 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 BEND5Q7L4P6 421 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ZDHHC17Q8IUH5 632 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ZNF687Q8N1G0 1237 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CELF5Q8N6W0 485 aaKnown RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 C3orf20Q8ND61 904 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ADAM32Q8TC27 787 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 DQX1Q8TE96 717 aaKnown RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 FAM149B1Q96BN6 582 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 DESI2Q9BSY9 194 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 KLF16Q9BXK1 252 aaPredicted RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 C8orf33Q9H7E9 229 aaPredicted RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ABCC13Q9NSE7 274 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 SMPD4Q9NXE4 827 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CNOT8Q9UFF9 292 aaKnown RBP16.34■□□□□ 0.21
VCX3B-204ENST00000453306 PCDHA13Q9Y5I0 950 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 CACNA1IQ9P0X4 2223 aa16.34■□□□□ 0.21
VCX3B-204ENST00000453306 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 SHISA7A6NL88 538 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 C2CD4BA6NLJ0 364 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 DPYSL4O14531 572 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 MSI1O43347 362 aaKnown RBP16.33■□□□□ 0.2
VCX3B-204ENST00000453306 IGLV3-25P01717 112 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 H2AFZP0C0S5 128 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 PSEN1P49768 467 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 SLC7A9P82251 487 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 ZNF252P-AS1Q0IIN9 211 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 EFEMP1Q12805 493 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 CCDC14Q49A88 953 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 C10orf120Q5SQS8 335 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 H2AFVQ71UI9 128 aa16.33■□□□□ 0.2
VCX3B-204ENST00000453306 BNIPLQ7Z465 357 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms