RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 IGLV3-27P01718 113 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 FCARP24071 287 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 SULT1E1P49888 294 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 PITX1P78337 314 aaPredicted RBP12.06□□□□□ -0.48
SCN9A-204ENST00000452182 ZXDBP98169 803 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 ZNF252P-AS1Q0IIN9 211 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 MTA1Q13330 715 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 MTSS1LQ765P7 747 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 ZDHHC14Q8IZN3 488 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 TDRD5Q8NAT2 981 aaKnown RBP12.06□□□□□ -0.48
SCN9A-204ENST00000452182 PLD4Q96BZ4 506 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 SLC39A13Q96H72 371 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 TBCBQ99426 244 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 TRIM7Q9C029 511 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 DDIT4Q9NX09 232 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 PRKAG3Q9UGI9 489 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 IP6K2Q9UHH9 426 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 TFR2Q9UP52 801 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 PAXBP1Q9Y5B6 917 aa12.06□□□□□ -0.48
SCN9A-204ENST00000452182 SLC12A8A0AV02 714 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ANHXE9PGG2 379 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 CCP110O43303 1012 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 KRT86O43790 486 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ECI2O75521 394 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 STC2O76061 302 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 SLC2A3P11169 496 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 IL9P15248 144 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 TFE3P19532 575 aaPredicted RBP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 PSMA2P25787 234 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 CXCR3P49682 368 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 USP4Q13107 963 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 PPP2R5DQ14738 602 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 C15orf59Q2T9L4 293 aaPredicted RBP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 NUGGCQ68CJ6 796 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 RNF10Q8N5U6 811 aaKnown RBP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ADAM32Q8TC27 787 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ADAMTS19Q8TE59 1207 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 NXPE3Q969Y0 559 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ELSPBP1Q96BH3 223 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 ZFP14Q9HCL3 533 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 PIGVQ9NUD9 493 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 SALL4Q9UJQ4 1053 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 DUSP10Q9Y6W6 482 aa12.05□□□□□ -0.48
SCN9A-204ENST00000452182 KIF26AQ9ULI4 1882 aaPredicted RBP12.05□□□□□ -0.48
SCN9A-204ENST00000452182 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 C2CD4DB7Z1M9 353 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 LEFTY2O00292 366 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 MSI1O43347 362 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 GREM1O60565 184 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 PROSCO94903 275 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 CCR1P32246 355 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 MAN1A1P33908 653 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 MLLT3P42568 568 aaPredicted RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 HDAC4P56524 1084 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 TBX4P57082 545 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ATP11AP98196 1134 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 DEUP1Q05D60 604 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ZNF77Q15935 545 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 IFI16Q16666 785 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 BRMS1LQ5PSV4 323 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 HTR3DQ70Z44 454 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SND1Q7KZF4 910 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 UNC45BQ8IWX7 931 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SH3RF2Q8TEC5 729 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 FAM172AQ8WUF8 416 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 FCRL2Q96LA5 508 aaPredicted RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 DCLK3Q9C098 648 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SMG9Q9H0W8 520 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 GKN1Q9NS71 199 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SMPD4Q9NXE4 827 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 UNC80Q8N2C7 3258 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 KCNU1A8MYU2 1149 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 LOC730098B7Z3J9 87 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 RNF8O76064 485 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 LATS1O95835 1130 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 C7P10643 843 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 PCK1P35558 622 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 VIPR2P41587 438 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 KCNQ1P51787 676 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 AIF1P55008 147 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 FCHO2Q0JRZ9 810 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 NME3Q13232 169 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 HTR4Q13639 388 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 CDO1Q16878 200 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ACBD5Q5T8D3 534 aaPredicted RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SH3PXD2AQ5TCZ1 1133 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 TANGO2Q6ICL3 276 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ADHFE1Q8IWW8 467 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms