RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RGS7P49802 495 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 MFAP3P55082 362 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 CREB5Q02930 508 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-208ENST00000452047 TCEAL6Q6IPX3 200 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 KIAA1211LQ6NV74 962 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 MSANTD2Q6P1R3 559 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 FRMD1Q8N878 549 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 TCEAL3Q969E4 200 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 ABCC13Q9NSE7 274 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPSF4-208ENST00000452047 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 MBD1Q9UIS9 605 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-208ENST00000452047 STOML2Q9UJZ1 356 aa13.04□□□□□ -0.32
CPSF4-208ENST00000452047 HBS1LQ9Y450 684 aaKnown RBP13.04□□□□□ -0.32
CPSF4-208ENST00000452047 MUC22E2RYF6 1773 aaPredicted RBP13.04□□□□□ -0.32
CPSF4-208ENST00000452047 CNOT1A5YKK6 2376 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CKAP5Q14008 2032 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 PIK3R2O00459 728 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 MSI1O43347 362 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CAVIN2O95810 425 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 IGLV3-27P01718 113 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 RPL34P49207 117 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 GEN1Q17RS7 908 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 IRF2BP1Q8IU81 584 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 IPO4Q8TEX9 1081 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CLEC4CQ8WTT0 213 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 RNF139Q8WU17 664 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
CPSF4-208ENST00000452047 SPACA7Q96KW9 195 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 HSFY1Q96LI6 401 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CACNA2D2Q9NY47 1150 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 CLEC4EQ9ULY5 219 aa13.03□□□□□ -0.32
CPSF4-208ENST00000452047 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 TM4SF5O14894 197 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 LATS1O95835 1130 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 LTFP02788 710 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 CYBBP04839 570 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 NDUFV2P19404 249 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 HOXD9P28356 352 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-208ENST00000452047 GPD2P43304 727 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.33
CPSF4-208ENST00000452047 ENPP2Q13822 863 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 MEA1Q16626 185 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 STPG1Q5TH74 334 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 PGBD3Q8N328 593 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 CRACR2AQ9BSW2 395 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 UBE2TQ9NPD8 197 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-208ENST00000452047 RAD54BQ9Y620 910 aa13.02□□□□□ -0.33
CPSF4-208ENST00000452047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 WASH3PC4AMC7 463 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 FBXO21O94952 628 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 FYNP06241 537 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 KRT5P13647 590 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 PTGER3P43115 390 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 DHPSP49366 369 aaPredicted RBP13.01□□□□□ -0.33
CPSF4-208ENST00000452047 ZNF445P59923 1031 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
CPSF4-208ENST00000452047 EIF4HQ15056 248 aaKnown RBP13.01□□□□□ -0.33
CPSF4-208ENST00000452047 SPDYCQ5MJ68 293 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 ADGRF1Q5T601 910 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 TMEM215Q68D42 235 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 SDE2Q6IQ49 451 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 GJB7Q6PEY0 223 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 LPCAT2Q7L5N7 544 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 ENOSF1Q7L5Y1 443 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 MLKLQ8NB16 471 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 MRGPRX1Q96LB2 322 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 SLC2A11Q9BYW1 496 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 CLSTN2Q9H4D0 955 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 ACP6Q9NPH0 428 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 THAP10Q9P2Z0 257 aaPredicted RBP13.01□□□□□ -0.33
CPSF4-208ENST00000452047 STON1Q9Y6Q2 735 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 PI4KAP42356 2102 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 GON4LQ3T8J9 2241 aa13.01□□□□□ -0.33
CPSF4-208ENST00000452047 IGHV1OR15-9A0A0B4J2B8 117 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 GTPBP10A4D1E9 387 aaKnown RBP13□□□□□ -0.33
CPSF4-208ENST00000452047 BECN2A8MW95 431 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 PATE3B3GLJ2 98 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 NPC1O15118 1278 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 SLC9A1P19634 815 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 HLA-FP30511 346 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 IL12RB1P42701 662 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 SGSHP51688 502 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 APBA1Q02410 837 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 RING1Q06587 406 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 DPCR1Q3MIW9 517 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 MPPE1Q53F39 396 aa13□□□□□ -0.33
CPSF4-208ENST00000452047 FAM133BQ5BKY9 247 aaKnown RBP13□□□□□ -0.33
CPSF4-208ENST00000452047 PPM1JQ5JR12 505 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms