RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 VPS36Q86VN1 386 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 XYLT1Q86Y38 959 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TMEM25Q86YD3 366 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 PHF13Q86YI8 300 aaPredicted RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 CCDC105Q8IYK2 499 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 CPXM2Q8N436 756 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 DQX1Q8TE96 717 aaKnown RBP9.25□□□□□ -0.93
COL8A1-203ENST00000452013 RNF34Q969K3 372 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 SLC2A13Q96QE2 648 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 PNKPQ96T60 521 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 PCDHB18PQ96TA0 734 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 IER2Q9BTL4 223 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 BBS2Q9BXC9 721 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TTYH3Q9C0H2 523 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 DEC1Q9P2X7 70 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TJP2Q9UDY2 1190 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 STAP1Q9ULZ2 295 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 TLR6Q9Y2C9 796 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 DENND4AQ7Z401 1863 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 ITIH6Q6UXX5 1313 aa9.25□□□□□ -0.93
COL8A1-203ENST00000452013 BRWD1Q9NSI6 2320 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 GOLGA8SH3BPF8 625 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 DYNC1I1O14576 645 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 IRAK2O43187 625 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 GALR2O43603 387 aaPredicted RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ACSL4O60488 711 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 DAB1O75553 588 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 GRAP2O75791 330 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 APOEP02649 317 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 APODP05090 189 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 GZMAP12544 262 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 CCR1P32246 355 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 GRIA2P42262 883 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 CENPCQ03188 943 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 C1QBPQ07021 282 aaKnown RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 FZD5Q13467 585 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 PPP2R5DQ14738 602 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ADGRF1Q5T601 910 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 FAM102AQ5T9C2 384 aaPredicted RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 SARM1Q6SZW1 724 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 MMS22LQ6ZRQ5 1243 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 TPGS1Q6ZTW0 290 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 SND1Q7KZF4 910 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ARCQ7LC44 396 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 C1orf210Q8IVY1 113 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 DRC7Q8IY82 874 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 NAT16Q8N8M0 369 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ATP6V0D2Q8N8Y2 350 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 SLC30A5Q8TAD4 765 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 CHFRQ96EP1 664 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 TMA16Q96EY4 203 aaKnown RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 SLC39A13Q96H72 371 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 VCPIP1Q96JH7 1222 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 TRIM5Q9C035 493 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 HAUS4Q9H6D7 363 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 FAM204AQ9H8W3 233 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 SPATA6Q9NWH7 488 aaPredicted RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ZNHIT6Q9NWK9 470 aaKnown RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 MARK1Q9P0L2 795 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 DLGAP2Q9P1A6 1054 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 STOML2Q9UJZ1 356 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 ARIH1Q9Y4X5 557 aaPredicted RBP9.24□□□□□ -0.93
COL8A1-203ENST00000452013 PAXBP1Q9Y5B6 917 aa9.24□□□□□ -0.93
COL8A1-203ENST00000452013 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 C2orf16Q68DN1 1984 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 A0A0A0MRY4 1105 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ANKRD62A6NC57 917 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 TBC1D3BA6NDS4 549 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 NEDD8-MDP1E9PL57 170 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 M0QYT0 321 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 MSI1O43347 362 aaKnown RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 LAMTOR5O43504 91 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ADCY5O95622 1261 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 IGLV3-27P01718 113 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SERPING1P05155 500 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 KRT3P12035 628 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SKILP12757 684 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 TYRP14679 529 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 COL9A1P20849 921 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ABCB4P21439 1286 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 CDC25BP30305 580 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 CASP14P31944 242 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 OPRD1P41143 372 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 TNFRSF4P43489 277 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SLC6A11P48066 632 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 CCINQ13939 588 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 E2F5Q15329 346 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SLC25A52Q3SY17 297 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 C2CD6Q53TS8 623 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ZC3H12AQ5D1E8 599 aaKnown RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ACBD5Q5T8D3 534 aaPredicted RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 GRAMD4Q6IC98 578 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 FSTL4Q6MZW2 842 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 TAC4Q86UU9 113 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 CCDC117Q8IWD4 279 aaPredicted RBP9.23□□□□□ -0.93
COL8A1-203ENST00000452013 FAM217AQ8IXS0 508 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 SPEM1Q8N4L4 309 aa9.23□□□□□ -0.93
COL8A1-203ENST00000452013 ZNF557Q8N988 423 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms