RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 MARCH2Q9P0N8 246 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 PCYOX1Q9UHG3 505 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 RAB21Q9UL25 225 aa10.05□□□□□ -0.8
RFC4-210ENST00000449502 TTC3P53804 2025 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 SLC12A8A0AV02 714 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 FAM92AA1XBS5 289 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 LCHNA4D1U4 455 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 SGK1O00141 431 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 IRAK2O43187 625 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 LIASO43766 372 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 SEC24AO95486 1093 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 VNN2O95498 520 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 MOCS2O96007 188 aaPredicted RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 GLUD1P00367 558 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 APOC2P02655 101 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ATF6P18850 670 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ACTN2P35609 894 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ADCY8P40145 1251 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ARSEP51690 589 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 VCPP55072 806 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 SCAPQ12770 1279 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 TAZQ16635 292 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 PABPC1LQ4VXU2 614 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 OTUD1Q5VV17 481 aaPredicted RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 MSANTD2Q6P1R3 559 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 DRICH1Q6PGQ1 229 aaPredicted RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 CYP4V2Q6ZWL3 525 aaPredicted RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 BNIPLQ7Z465 357 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 MIB1Q86YT6 1006 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 TCEAL8Q8IYN2 117 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ATP6V0D2Q8N8Y2 350 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 BBOF1Q8ND07 529 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 CASP10Q92851 521 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 CSPG4P5Q96PW8 444 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 FAM118BQ9BPY3 351 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 HINFPQ9BQA5 517 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 ERP44Q9BS26 406 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 TTLL2Q9BWV7 592 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 TRIM31Q9BZY9 425 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 SIK2Q9H0K1 926 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 DPH5Q9H2P9 285 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 DPP7Q9UHL4 492 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 MSRAQ9UJ68 235 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 NUDT5Q9UKK9 219 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 DRG1Q9Y295 367 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 TLR6Q9Y2C9 796 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 R3HDM2Q9Y2K5 976 aaKnown RBP10.04□□□□□ -0.8
RFC4-210ENST00000449502 ASB3Q9Y575 518 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 PCDHA11Q9Y5I1 949 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 HEY1Q9Y5J3 304 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 INSL5Q9Y5Q6 135 aa10.04□□□□□ -0.8
RFC4-210ENST00000449502 MSI1O43347 362 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 TGM5O43548 720 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 TLR5O60602 858 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 LILRB3O75022 631 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 ZNF189O75820 626 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 HMBSP08397 361 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 ATP5C1P36542 298 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 NR2C2P49116 596 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 NNTQ13423 1086 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 SHHQ15465 462 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 PPM1LQ5SGD2 360 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 ACBD5Q5T8D3 534 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 RASIP1Q5U651 963 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 RWDD4Q6NW29 188 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 TTC27Q6P3X3 843 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 FBXO38Q6PIJ6 1188 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 CCNI2Q6ZMN8 369 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 RFX8Q6ZV50 586 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 DNAJB7Q7Z6W7 309 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 CDKL3Q8IVW4 592 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 UNC45BQ8IWX7 931 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 PYROXD2Q8N2H3 581 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 KREMEN2Q8NCW0 462 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 FAM71BQ8TC56 605 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 SPPL3Q8TCT6 385 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.03□□□□□ -0.8
RFC4-210ENST00000449502 NKD2Q969F2 451 aaPredicted RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 HAPLN3Q96S86 360 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 C17orf80Q9BSJ5 609 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms