RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 COCHO43405 550 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 TBX18O95935 607 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 KRT1P04264 644 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 KDELR1P24390 212 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 HYAL1Q12794 435 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 EFEMP1Q12805 493 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 ARL13BQ3SXY8 428 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 HS6ST3Q8IZP7 471 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 FCRL2Q96LA5 508 aaPredicted RBP20.02■□□□□ 0.79
RPS28-202ENST00000449223 CORO1BQ9BR76 489 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 MTMR10Q9NXD2 777 aa20.02■□□□□ 0.79
RPS28-202ENST00000449223 RCOR3Q9P2K3 495 aaPredicted RBP20.02■□□□□ 0.79
RPS28-202ENST00000449223 DNMT3BQ9UBC3 853 aaKnown RBP20.02■□□□□ 0.79
RPS28-202ENST00000449223 DOCK6Q96HP0 2047 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 CLUHO75153 1309 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 SYNJ2BP-COX16A0A087WUM0 186 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 PGRMC1O00264 195 aaKnown RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 MSI1O43347 362 aaKnown RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 CEP104O60308 925 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 GLP2RO95838 553 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 GJC1P36383 396 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 CDKN2BP42772 138 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 ZNF135P52742 658 aaPredicted RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 ITIH3Q06033 890 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 SEMA3BQ13214 749 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 ZNF211Q13398 564 aaPredicted RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 TFDP3Q5H9I0 405 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 MFSD7Q6UXD7 560 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 MAP7D3Q8IWC1 876 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 TSC1Q92574 1164 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 MRPS31Q92665 395 aaKnown RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 HAPLN3Q96S86 360 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 NAP1L3Q99457 506 aaPredicted RBP20.01■□□□□ 0.79
RPS28-202ENST00000449223 ZNF670Q9BS34 389 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 COX16Q9P0S2 106 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 ZMYM5Q9UJ78 669 aa20.01■□□□□ 0.79
RPS28-202ENST00000449223 CCDC195A0A1B0GUA6 201 aa20■□□□□ 0.79
RPS28-202ENST00000449223 LRRD1A4D1F6 860 aa20■□□□□ 0.79
RPS28-202ENST00000449223 C2orf78A6NCI8 922 aa20■□□□□ 0.79
RPS28-202ENST00000449223 PDE2AO00408 941 aaPredicted RBP20■□□□□ 0.79
RPS28-202ENST00000449223 RHOP08100 348 aa20■□□□□ 0.79
RPS28-202ENST00000449223 DDX6P26196 483 aaKnown RBP eCLIP20■□□□□ 0.79
RPS28-202ENST00000449223 L1CAMP32004 1257 aa20■□□□□ 0.79
RPS28-202ENST00000449223 CETN2P41208 172 aa20■□□□□ 0.79
RPS28-202ENST00000449223 TBX4P57082 545 aa20■□□□□ 0.79
RPS28-202ENST00000449223 DPYSL3Q14195 570 aa20■□□□□ 0.79
RPS28-202ENST00000449223 TCEAL5Q5H9L2 206 aa20■□□□□ 0.79
RPS28-202ENST00000449223 EFHC2Q5JST6 749 aa20■□□□□ 0.79
RPS28-202ENST00000449223 ACBD5Q5T8D3 534 aaPredicted RBP20■□□□□ 0.79
RPS28-202ENST00000449223 PRPF38BQ5VTL8 546 aaKnown RBP20■□□□□ 0.79
RPS28-202ENST00000449223 SPOCD1Q6ZMY3 1216 aa20■□□□□ 0.79
RPS28-202ENST00000449223 KCTD6Q8NC69 237 aa20■□□□□ 0.79
RPS28-202ENST00000449223 HSPH1Q92598 858 aa20■□□□□ 0.79
RPS28-202ENST00000449223 FAF2Q96CS3 445 aa20■□□□□ 0.79
RPS28-202ENST00000449223 MS4A14Q96JA4 679 aa20■□□□□ 0.79
RPS28-202ENST00000449223 GCNAQ96QF7 691 aa20■□□□□ 0.79
RPS28-202ENST00000449223 TKTL2Q9H0I9 626 aa20■□□□□ 0.79
RPS28-202ENST00000449223 OSBPL2Q9H1P3 480 aa20■□□□□ 0.79
RPS28-202ENST00000449223 PCDH18Q9HCL0 1135 aa20■□□□□ 0.79
RPS28-202ENST00000449223 ANLNQ9NQW6 1124 aa20■□□□□ 0.79
RPS28-202ENST00000449223 HCFC1R1Q9NWW0 138 aa20■□□□□ 0.79
RPS28-202ENST00000449223 C2orf16Q68DN1 1984 aa20■□□□□ 0.79
RPS28-202ENST00000449223 HELZP42694 1942 aaKnown RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 hCG_1818297A0A087WSY0 165 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 IL4RP24394 825 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 GTF2F1P35269 517 aaKnown RBP eCLIP19.99■□□□□ 0.79
RPS28-202ENST00000449223 CCR2P41597 374 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 PAFAH1B1P43034 410 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 CDH6P55285 790 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 COG7P83436 770 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 NRG1Q02297 640 aaPredicted RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 KLF1Q13351 362 aaPredicted RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 CA9Q16790 459 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 ZC3H12AQ5D1E8 599 aaKnown RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 PRSS36Q5K4E3 855 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 AADACL2Q6P093 401 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 ANKS1BQ7Z6G8 1248 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 SLC13A5Q86YT5 568 aaPredicted RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 CEP112Q8N8E3 955 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 ACSF2Q96CM8 615 aaPredicted RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 RPGRIP1Q96KN7 1286 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 CAPZA3Q96KX2 299 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 OSBPL8Q9BZF1 889 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 RNF38Q9H0F5 515 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 RASAL2Q9UJF2 1139 aa19.99■□□□□ 0.79
RPS28-202ENST00000449223 PRRC2BQ5JSZ5 2229 aaKnown RBP19.99■□□□□ 0.79
RPS28-202ENST00000449223 REV3LO60673 3130 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 PI4K2BG5E9Z4 385 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 MOSPD3O75425 235 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 FGGP02679 453 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 CD48P09326 243 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 SRGAP2BP0DMP2 458 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 SLC7A9P82251 487 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 COL19A1Q14993 1142 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 ODF2Q5BJF6 829 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 CCDC181Q5TID7 509 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 NUGGCQ68CJ6 796 aa19.98■□□□□ 0.79
RPS28-202ENST00000449223 PDZD4Q76G19 769 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms