RNA–Protein interactions for RNA: ENST00000449194.6

PPHLN1-208, Transcript of periphilin 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPHLN1, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-208	ENST00000449194	GPATCH11	Q8N954	259 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF527	Q8NB42	609 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SPATA3	Q8NHX4	192 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TRIM63	Q969Q1	353 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	NMD3	Q96D46	503 aa	Known RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TRIB1	Q96RU8	372 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	P2RX7	Q99572	595 aa	Known RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ISCA1	Q9BUE6	129 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TRIM54	Q9BYV2	358 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	DPH1	Q9BZG8	443 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MYLK2	Q9H1R3	596 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	NRIP3	Q9NQ35	241 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SACM1L	Q9NTJ5	587 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	INTS13	Q9NVM9	706 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	FLRT1	Q9NZU1	646 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	COL20A1	Q9P218	1284 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	LZTS1	Q9Y250	596 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	NSD2	O96028	1365 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ANKRD36B	Q8N2N9	1353 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	CCDC195	A0A1B0GUA6	201 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194		A0A1W2PS29	197 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	FFAR2	O15552	330 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	GJB1	P08034	283 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KCNA3	P22001	575 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	RPS7	P62081	194 aa	Known RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TUBA4A	P68366	448 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	HTRA4	P83105	476 aa	Predicted RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	CPSF1	Q10570	1443 aa	Known RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	FHL1	Q13642	323 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SLC35G1	Q2M3R5	365 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	OR6B3	Q8NGW1	331 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TNPO1	Q92973	898 aa	Known RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF566	Q969W8	418 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MYO1A	Q9UBC5	1043 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	DKK3	Q9UBP4	350 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF69	Q9UC07	566 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZDHHC8	Q9ULC8	765 aa		4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.27	□□□□□ -1.73
PPHLN1-208	ENST00000449194	USP47	Q96K76	1375 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KAT6A	Q92794	2004 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF521	Q96K83	1311 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TRIM43B	A6NCK2	446 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	LINC00473	A8K010	186 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194		F5H697	171 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	POLRMT	O00411	1230 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MPPED1	O15442	326 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TBC1D4	O60343	1298 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	PLA2G6	O60733	806 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KIF20A	O95235	890 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	CSTB	P04080	98 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	PRR35	P0CG20	571 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	HSD3B1	P14060	373 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	FGFR2	P21802	821 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	HMGB2	P26583	209 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	EEF1G	P26641	437 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KCNJ5	P48544	419 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	PIK3CG	P48736	1102 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF135	P52742	658 aa	Predicted RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	EXOSC9	Q06265	439 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF626	Q68DY1	528 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ZNF783	Q6ZMS7	281 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TXLNB	Q8N3L3	684 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SNX19	Q92543	992 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	RPL36AL	Q969Q0	106 aa	Known RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	BRD9	Q9H8M2	597 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SMURF2	Q9HAU4	748 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SERHL	Q9NQF3	203 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TBC1D30	Q9Y2I9	924 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MED16	Q9Y2X0	877 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SLIT3	O75094	1523 aa		4.26	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KIAA1551	Q9HCM1	1747 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	VIRMA	Q69YN4	1812 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	QRICH2	Q9H0J4	1663 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KDM6A	O15550	1401 aa	Predicted RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	GOLGA6L3	A6NEY3	463 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	BTN3A1	O00481	513 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TP73	O15350	636 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SKAP2	O75563	359 aa	Predicted RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SRGN	P10124	158 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ALDH9A1	P49189	494 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	ANXA11	P50995	505 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	RPS16	P62249	146 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	BOP1	Q14137	746 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	KLHL22	Q53GT1	634 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	C11orf87	Q6NUJ2	197 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TAF2	Q6P1X5	1199 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	MMS22L	Q6ZRQ5	1243 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	BEND5	Q7L4P6	421 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	RASAL3	Q86YV0	1011 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	TEX19	Q8NA77	164 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	PCSK9	Q8NBP7	692 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	IPO4	Q8TEX9	1081 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SECISBP2L	Q93073	1101 aa	Known RBP	4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	IQCD	Q96DY2	449 aa		4.25	□□□□□ -1.73
PPHLN1-208	ENST00000449194	SNX22	Q96L94	193 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms