RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ZNF513Q8N8E2 541 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 NAT16Q8N8M0 369 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 ZMIZ2Q8NF64 920 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 HMGB4Q8WW32 186 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 RLN3Q8WXF3 142 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 SMOQ99835 787 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 IMPG2Q9BZV3 1241 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 NIF3L1Q9GZT8 377 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 UBE2TQ9NPD8 197 aaPredicted RBP14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 NLRC4Q9NPP4 1024 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 WDR35Q9P2L0 1181 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 DNAJC12Q9UKB3 198 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 SCML2Q9UQR0 700 aa14.44□□□□□ -0.1
PDLIM2-213ENST00000448520 PLXND1Q9Y4D7 1925 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 A0A1W2PQC6 194 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 TCRBV21S2A2A0A5A6 115 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 BEST1O76090 585 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 NTSR1P30989 418 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 MAP3K7CLP57077 242 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 POLR2FP61218 127 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 ARHGAP44Q17R89 818 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 TRIM61Q5EBN2 209 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 SH3PXD2AQ5TCZ1 1133 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 KLHDC10Q6PID8 442 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 SLC23A3Q6PIS1 610 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 TMEFF1Q8IYR6 380 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 TERB1Q8NA31 727 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 CCDC150Q8NCX0 1101 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 NEK11Q8NG66 645 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 CEP76Q8TAP6 659 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 SLC2A14Q8TDB8 520 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 MRFAP1L1Q96HT8 127 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 HNRNPABQ99729 332 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 KLF16Q9BXK1 252 aaPredicted RBP14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 CYP3A43Q9HB55 503 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 PNPLA8Q9NP80 782 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 CYLDQ9NQC7 956 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 APEX2Q9UBZ4 518 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 CEP192Q8TEP8 1941 aa14.43□□□□□ -0.1
PDLIM2-213ENST00000448520 PATE3B3GLJ2 98 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 ZNF217O75362 1048 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CALCAP01258 141 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 TPM3P06753 285 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 FAM200BP0CF97 657 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CCDC130P13994 396 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 UCHL3P15374 230 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CD58P19256 250 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 PLA2G4AP47712 749 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 ORC1Q13415 861 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CUL2Q13617 745 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 RAPGEF1Q13905 1077 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 C10orf76Q5T2E6 689 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 LYSMD4Q5XG99 296 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 GRAMD4Q6IC98 578 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 ZNF276Q8N554 614 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 C12orf29Q8N999 325 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 SPC24Q8NBT2 197 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CPLX3Q8WVH0 158 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 PLCB1Q9NQ66 1216 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 HMGXB4Q9UGU5 601 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 MBD1Q9UIS9 605 aaPredicted RBP14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 PILRBQ9UKJ0 227 aa14.42□□□□□ -0.1
PDLIM2-213ENST00000448520 GIPC1O14908 333 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 CACNG3O60359 315 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 TBX18O95935 607 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 GYPCP04921 128 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 PROS1P07225 676 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 IRF1P10914 325 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 HOXB2P14652 356 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 PTGER3P43115 390 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 PSEN1P49768 467 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 DUOXA1Q1HG43 343 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 UAP1L1Q3KQV9 507 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 RABEPKQ7Z6M1 372 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 TADA2BQ86TJ2 420 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 UBR7Q8N806 425 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 FRMD1Q8N878 549 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 WBP2Q969T9 261 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 BBS2Q9BXC9 721 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 NAA15Q9BXJ9 866 aaKnown RBP14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 SLC32A1Q9H598 525 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 DNAJC17Q9NVM6 304 aaKnown RBP14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 MARK1Q9P0L2 795 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 DNMT3LQ9UJW3 386 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 ITIH6Q6UXX5 1313 aa14.41□□□□□ -0.1
PDLIM2-213ENST00000448520 CACNA1EQ15878 2313 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 UPK3BL1B0FP48 263 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 UPK3BL2E5RIL1 263 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 GFRA2O00451 464 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 GREM1O60565 184 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 TYRP14679 529 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 GABRG2P18507 467 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 ACO1P21399 889 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms