RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ZFHX2Q9C0A1 2572 aaPredicted RBP13.29□□□□□ -0.28
PRPF40A-203ENST00000448428 PIEZO1Q92508 2521 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 SGK1O00141 431 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 TSPAN3O60637 253 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 ADAM23O75077 832 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 HNRNPLP14866 589 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 CYP11B1P15538 503 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 CDK11BP21127 795 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 DGKGP49619 791 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 TBX4P57082 545 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 YWHAZP63104 245 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 RING1Q06587 406 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 SIM2Q14190 667 aaPredicted RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 TAF5Q15542 800 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 CRY1Q16526 586 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 LPAL2Q16609 132 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 HSF5Q4G112 596 aaPredicted RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 ANO6Q4KMQ2 910 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 ADGRF1Q5T601 910 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 BEND5Q7L4P6 421 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 ANKRD20A12PQ8NF67 263 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 DQX1Q8TE96 717 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 RUBCNQ92622 972 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 FAM149B1Q96BN6 582 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 PIWIL1Q96J94 861 aaKnown RBP13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 GANQ9H2C0 597 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 EBF1Q9UH73 591 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 STOML2Q9UJZ1 356 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 CLEC4EQ9ULY5 219 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 STARD13Q9Y3M8 1113 aa13.28□□□□□ -0.28
PRPF40A-203ENST00000448428 USP34Q70CQ2 3546 aa13.27□□□□□ -0.28
PRPF40A-203ENST00000448428 MYO15AQ9UKN7 3530 aa13.27□□□□□ -0.28
PRPF40A-203ENST00000448428 RALGAPA1Q6GYQ0 2036 aa13.27□□□□□ -0.28
PRPF40A-203ENST00000448428 GOLGA6L7A0A1B0GV03 622 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 F8VZ95 297 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 GFRA2O00451 464 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 CAPN9O14815 690 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 AXIN1O15169 862 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 EPHB6O15197 1021 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 APBB3O95704 486 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 ERBB2P04626 1255 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 CYBBP04839 570 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 MPPE1Q53F39 396 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 EOGTQ5NDL2 527 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 UNC45BQ8IWX7 931 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 ZNF513Q8N8E2 541 aaPredicted RBP13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 TSTD1Q8NFU3 115 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 DDI1Q8WTU0 396 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 DDX1Q92499 740 aaKnown RBP13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 AZIN2Q96A70 460 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 TMA16Q96EY4 203 aaKnown RBP13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 NAT10Q9H0A0 1025 aaKnown RBP13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 POPDC2Q9HBU9 364 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 FAM207AQ9NSI2 230 aaPredicted RBP13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.29
PRPF40A-203ENST00000448428 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 RPP40O75818 363 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 LATS1O95835 1130 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 ATP1A3P13637 1013 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SLC6A4P31645 630 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 CDH5P33151 784 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 DGKEP52429 567 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 UBXN1Q04323 297 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SYCP1Q15431 976 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 EFHC1Q5JVL4 640 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 TAF3Q5VWG9 929 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 EGFLAMQ63HQ2 1017 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 NUGGCQ68CJ6 796 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 OR6B2Q6IFH4 312 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 FAM183BPQ6ZVS7 135 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 CEP68Q76N32 757 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 NOP9Q86U38 636 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 DHX40Q8IX18 779 aaKnown RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SLC39A13Q96H72 371 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 FCRL2Q96LA5 508 aaPredicted RBP13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SERPINB11Q96P15 392 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 ACOX2Q99424 681 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 BPIFA3Q9BQP9 254 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 TRIM62Q9BVG3 475 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SLC2A11Q9BYW1 496 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 PDCL3Q9H2J4 239 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 RAB23Q9ULC3 237 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 TLR6Q9Y2C9 796 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SLC27A6Q9Y2P4 619 aa13.26□□□□□ -0.29
PRPF40A-203ENST00000448428 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
PRPF40A-203ENST00000448428 ACSL4O60488 711 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms