RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HOXD12P35452 270 aa29.62■■■□□ 2.33
CBX4-202ENST00000448310 FKBP3Q00688 224 aaKnown RBP29.62■■■□□ 2.33
CBX4-202ENST00000448310 DUOXA1Q1HG43 343 aa29.62■■■□□ 2.33
CBX4-202ENST00000448310 TRIML1Q8N9V2 468 aa29.62■■■□□ 2.33
CBX4-202ENST00000448310 TOP3BO95985 862 aaKnown RBP29.61■■■□□ 2.33
CBX4-202ENST00000448310 CD19P15391 556 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 SPINK2P20155 84 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 IL12RB1P42701 662 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 BCAT1P54687 386 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 FUT11Q495W5 492 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 COBLL1Q53SF7 1204 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 SGO2Q562F6 1265 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 PM20D1Q6GTS8 502 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 CEP76Q8TAP6 659 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 UBA3Q8TBC4 463 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 GSDMAQ96QA5 445 aa29.61■■■□□ 2.33
CBX4-202ENST00000448310 FAM124BQ9H5Z6 455 aaPredicted RBP29.61■■■□□ 2.33
CBX4-202ENST00000448310 XPO1O14980 1071 aaKnown RBP29.6■■■□□ 2.33
CBX4-202ENST00000448310 SERPINF2P08697 491 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 ADIGQ0VDE8 80 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 ENGASEQ8NFI3 743 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 OR2I1PQ8NGU4 316 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 SLC35C1Q96A29 364 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 PIWIL1Q96J94 861 aaKnown RBP29.6■■■□□ 2.33
CBX4-202ENST00000448310 LRRC4Q9HBW1 653 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 CAPN10Q9HC96 672 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 THAP10Q9P2Z0 257 aaPredicted RBP29.6■■■□□ 2.33
CBX4-202ENST00000448310 HESX1Q9UBX0 185 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 CKAP5Q14008 2032 aa29.6■■■□□ 2.33
CBX4-202ENST00000448310 GOLGA6L4A6NEF3 574 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 NDUFS2O75306 463 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 CYBBP04839 570 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 ATXN3P54252 364 aaPredicted RBP29.59■■■□□ 2.33
CBX4-202ENST00000448310 GFPT1Q06210 699 aaPredicted RBP29.59■■■□□ 2.33
CBX4-202ENST00000448310 BST2Q10589 180 aaKnown RBP29.59■■■□□ 2.33
CBX4-202ENST00000448310 STARD3Q14849 445 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 FMNL3Q8IVF7 1028 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 CPXM2Q8N436 756 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 DDI1Q8WTU0 396 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 EDEM1Q92611 657 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 SMARCE1Q969G3 411 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 PLD4Q96BZ4 506 aa29.59■■■□□ 2.33
CBX4-202ENST00000448310 ARMCX3Q9UH62 379 aaPredicted RBP29.59■■■□□ 2.33
CBX4-202ENST00000448310 SMC2O95347 1197 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 ANKS1BQ7Z6G8 1248 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 RGL4Q8IZJ4 473 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 UBR7Q8N806 425 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 SORCS1Q8WY21 1168 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 IPO9Q96P70 1041 aaKnown RBP29.58■■■□□ 2.33
CBX4-202ENST00000448310 MKRN2Q9H000 416 aaKnown RBP29.58■■■□□ 2.33
CBX4-202ENST00000448310 PRDM16Q9HAZ2 1276 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 SFMBT1Q9UHJ3 866 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 WASF3Q9UPY6 502 aa29.58■■■□□ 2.33
CBX4-202ENST00000448310 YWHAEP62258 255 aaKnown RBP29.57■■■□□ 2.32
CBX4-202ENST00000448310 TRIP4Q15650 581 aaPredicted RBP29.57■■■□□ 2.32
CBX4-202ENST00000448310 ISM2Q6H9L7 571 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 FAM217AQ8IXS0 508 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 SPATA20Q8TB22 786 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 UCMAQ8WVF2 138 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 ZNF419Q96HQ0 510 aaPredicted RBP29.57■■■□□ 2.32
CBX4-202ENST00000448310 CIPCQ9C0C6 399 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 ELOVL2Q9NXB9 296 aa29.57■■■□□ 2.32
CBX4-202ENST00000448310 YJEFN3A6XGL0 299 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 C1QTNF9BB2RNN3 333 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 E7ENQ6 273 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 O00370 1275 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 TSPAN3O60637 253 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 C1QTNF9P0C862 333 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 VDRP11473 427 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 MAOBP27338 520 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 LRRC63Q05C16 580 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 SEMA3BQ13214 749 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 ENPP2Q13822 863 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 ZNF234Q14588 700 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 BSPRYQ5W0U4 402 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 TMEM215Q68D42 235 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 MINDY1Q8N5J2 469 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 RNF139Q8WU17 664 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 SLC32A1Q9H598 525 aa29.56■■■□□ 2.32
CBX4-202ENST00000448310 OLA1Q9NTK5 396 aaKnown RBP29.56■■■□□ 2.32
CBX4-202ENST00000448310 CD6P30203 668 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 RABEPKQ7Z6M1 372 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 PIP4P1Q86T03 277 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 CACUL1Q86Y37 369 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 SIX6OS1Q8N1H7 587 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 HDDC3Q8N4P3 179 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 TFAP2BQ92481 460 aa29.55■■■□□ 2.32
CBX4-202ENST00000448310 TOE1Q96GM8 510 aaKnown RBP29.55■■■□□ 2.32
CBX4-202ENST00000448310 SPAARA0A1B0GVQ0 90 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 KCNJ18B7U540 433 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 ARHGAP33O14559 1287 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 NPC1O15118 1278 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 MSI1O43347 362 aaKnown RBP29.54■■■□□ 2.32
CBX4-202ENST00000448310 LCP1P13796 627 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 PRKCHP24723 683 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 HOXD9P28356 352 aaPredicted RBP29.54■■■□□ 2.32
CBX4-202ENST00000448310 FMO5P49326 533 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 HARS2P49590 506 aaKnown RBP29.54■■■□□ 2.32
CBX4-202ENST00000448310 TMEM270Q6UE05 265 aa29.54■■■□□ 2.32
CBX4-202ENST00000448310 RBBP8NLQ8NC74 664 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms