RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
GNE-203ENST00000447283 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
GNE-203ENST00000447283 CPSF3Q9UKF6 684 aaKnown RBP11.86□□□□□ -0.51
GNE-203ENST00000447283 PHF24Q9UPV7 400 aa11.86□□□□□ -0.51
GNE-203ENST00000447283 ENDOD1O94919 500 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 MYL2P10916 166 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 MIPP30301 263 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 RAP1GDS1P52306 607 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 LBX1P52954 281 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 SATB1Q01826 763 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ROR1Q01973 937 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CDK18Q07002 472 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 MTM1Q13496 603 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SNX17Q15036 470 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 FBXO46Q6PJ61 603 aaPredicted RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 SCARA5Q6ZMJ2 495 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 LRRC74BQ6ZQY2 392 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SLC26A11Q86WA9 606 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SPATA18Q8TC71 538 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 APBB2Q92870 758 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 C7orf26Q96N11 449 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CPXM1Q96SM3 734 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ADPGKQ9BRR6 497 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 FRMD8Q9BZ67 464 aaPredicted RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 YIPF3Q9GZM5 350 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ARHGEF4Q9NR80 690 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 METTL5Q9NRN9 209 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 SPATS2LQ9NUQ6 558 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.85□□□□□ -0.51
GNE-203ENST00000447283 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ZNF180Q9UJW8 692 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 COPEO14579 308 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CAPN9O14815 690 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 MAGEC1O60732 1142 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TBX10O75333 385 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 FESP07332 822 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 MCF2P10911 925 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 NEFHP12036 1026 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SKIP12755 728 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 PEX19P40855 299 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TUBP50607 506 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SESN3P58005 492 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 YWHAGP61981 247 aaKnown RBP eCLIP11.85□□□□□ -0.51
GNE-203ENST00000447283 AP1B1Q10567 949 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ZRSR2Q15696 482 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 TTC7BQ86TV6 843 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 EMC1Q8N766 993 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SLC43A3Q8NBI5 491 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 WDR60Q8WVS4 1066 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 MCRS1Q96EZ8 462 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 SRPK1Q96SB4 655 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 NMUR2Q9GZQ4 415 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CDT1Q9H211 546 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 PDZD7Q9H5P4 517 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ZNF212Q9UDV6 495 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 OGDHLQ9ULD0 1010 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 USP18Q9UMW8 372 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 ASB3Q9Y575 518 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
GNE-203ENST00000447283 TRIP12Q14669 1992 aaPredicted RBP11.85□□□□□ -0.51
GNE-203ENST00000447283 CAPN14A8MX76 684 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 AHCYL1O43865 530 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 RNF8O76064 485 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 ERBB2P04626 1255 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 SNRPAP09012 282 aaKnown RBP11.84□□□□□ -0.51
GNE-203ENST00000447283 CD19P15391 556 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 AXLP30530 894 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 HOXA11P31270 313 aaPredicted RBP11.84□□□□□ -0.51
GNE-203ENST00000447283 THPOP40225 353 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 CCNFP41002 786 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 GABRB2P47870 512 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 TAF5Q15542 800 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 DARS2Q6PI48 645 aaKnown RBP11.84□□□□□ -0.51
GNE-203ENST00000447283 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 STMN2Q93045 179 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 WNT8BQ93098 351 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 SEZ6LQ9BYH1 1024 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 IQCGQ9H095 443 aaKnown RBP11.84□□□□□ -0.51
GNE-203ENST00000447283 VCXQ9H320 206 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 PLLPQ9Y342 182 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 C2orf71A6NGG8 1288 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 TRIM49D1C9J1S8 452 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 E5RJQ4 531 aa11.84□□□□□ -0.51
GNE-203ENST00000447283 F8W8V4 182 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms