RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZC3H12DA2A288 527 aaKnown RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 TSPY2A6NKD2 308 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 AURKAO14965 403 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 TADA2AO75478 443 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 RFPL3O75679 317 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 C22orf31O95567 290 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 CYBBP04839 570 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 PRKCGP05129 697 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 EPHX1P07099 455 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 ITGA4P13612 1032 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 DARSP14868 501 aaKnown RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 KCNA2P16389 499 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 VAMP1P23763 118 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 MC3RP41968 323 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 INHBCP55103 352 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 MLLT10P55197 1068 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 CYP4F2P78329 520 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 GABREP78334 506 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 PRR5P85299 388 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 CREMQ03060 361 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 RUNX3Q13761 415 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 RAB33AQ14088 237 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 ZXDCQ2QGD7 858 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 SKOR2Q2VWA4 1001 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 FBXO43Q4G163 708 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 FAM171A1Q5VUB5 890 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 CYP2R1Q6VVX0 501 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 GPR65Q8IYL9 337 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF654Q8IZM8 581 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 LRRC71Q8N4P6 559 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 SCLT1Q96NL6 688 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 ZDHHC5Q9C0B5 715 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 RSAD1Q9HA92 442 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 GEMIN8Q9NWZ8 242 aaKnown RBP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 PCDHB2Q9Y5E7 798 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 CRYBG3Q68DQ2 2970 aa5.52□□□□□ -1.53
SDCBP-205ENST00000447267 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1B0GVT2 93 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF623O75123 536 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 SURF6O75683 361 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 RECQL4O94761 1208 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 SEC24AO95486 1093 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PRAMEF12O95522 483 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CER1O95813 267 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 APPP05067 770 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 GLI4P10075 376 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 GNSP15586 552 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 GRK6P43250 576 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 TDO2P48775 406 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 SCNN1GP51170 649 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 DSC1Q08554 894 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 BYSLQ13895 437 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PTPAQ15257 358 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 EMC10Q5UCC4 262 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 BICRALQ6AI39 1079 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CAPRIN2Q6IMN6 1127 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PAQR3Q6TCH7 311 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 JAMLQ86YT9 394 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 MCEMP1Q8IX19 187 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 ZCCHC9Q8N567 271 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 LINC01356Q8N9X3 169 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 BPIFB1Q8TDL5 484 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PIGOQ8TEQ8 1089 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 TNPO1Q92973 898 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PGBD4Q96DM1 585 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PAAF1Q9BRP4 392 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 FAM124BQ9H5Z6 455 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CASS4Q9NQ75 786 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF71Q9NQZ8 489 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 WHRNQ9P202 907 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CEP72Q9P209 647 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 APEX2Q9UBZ4 518 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CGGBP1Q9UFW8 167 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 ADAM28Q9UKQ2 775 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 MMP17Q9ULZ9 603 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CLCA2Q9UQC9 943 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PIN4Q9Y237 131 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 SF3B6Q9Y3B4 125 aaKnown RBP5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PCDHGB2Q9Y5G2 931 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PCDHGA1Q9Y5H4 931 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 CDY1Q9Y6F8 540 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 KAT6AQ92794 2004 aa5.51□□□□□ -1.53
SDCBP-205ENST00000447267 PCSK5Q92824 1860 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 IGHV1OR15-9A0A0B4J2B8 117 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 A0A1B0GTW7 788 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 TCRBV21S2A2A0A5A6 115 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 ARHGEF37A1IGU5 675 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 GCOM1H8Y6P7 765 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 K7EQS6 105 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SGK1O00141 431 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 PRRG1O14668 218 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 DHX16O60231 1041 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 HBP1O60381 514 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 RANBP6O60518 1105 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 RTN2O75298 545 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 BCAR3O75815 825 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms