RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 A0A1B0GTQ1 180 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 A1L4Q6 167 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MTMR11A4FU01 709 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 KCNK3O14649 394 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 TMPRSS2O15393 492 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 GADD45BO75293 160 aaPredicted RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 SOAT2O75908 522 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 AGFG2O95081 481 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 OAZ2O95190 189 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 NFATC1O95644 943 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MT-CO3P00414 261 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 OR4Q2P0C623 313 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 TCF3P15923 654 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 ATF6P18850 670 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CIITAP33076 1130 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CTSKP43235 329 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 SLC6A11P48066 632 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 NPEPPSP55786 919 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 ST3GAL1Q11201 340 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 KCNT1Q5JUK3 1230 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 TXNDC8Q6A555 127 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 KDM7AQ6ZMT4 941 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CATIPQ7Z7H3 387 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MON1AQ86VX9 555 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 EXOC8Q8IYI6 725 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 OTUD7AQ8TE49 926 aaPredicted RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 ALKBH8Q96BT7 664 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 EVI5LQ96CN4 794 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MOCOSQ96EN8 888 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 SGF29Q96ES7 293 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MRGPRX1Q96LB2 322 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 GCNAQ96QF7 691 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 PNKPQ96T60 521 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 RIT2Q99578 217 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 DKK3Q9UBP4 350 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 EIF2B4Q9UI10 523 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 ANAPC2Q9UJX6 822 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 hCG_1642624A0A1W2PR95 340 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CDRT15L2A8MXV6 281 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MSH4O15457 936 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CHMP2AO43633 222 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 DFNA5O60443 496 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CLDN1O95832 211 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 APODP05090 189 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 CYP17A1P05093 508 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 HOXB2P14652 356 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 NMT1P30419 496 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 GRIA2P42262 883 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 IL9RQ01113 521 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 NMIQ13287 307 aaPredicted RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 CLCA4Q14CN2 919 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 TBR1Q16650 682 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 GLRA4Q5JXX5 417 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 WWC2Q6AWC2 1192 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 MAMDC2Q7Z304 686 aaPredicted RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 TRMT11Q7Z4G4 463 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 C12orf40Q86WS4 652 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 PTRH1Q86Y79 214 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 MIB1Q86YT6 1006 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 WFDC3Q8IUB2 231 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 COL27A1Q8IZC6 1860 aaPredicted RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 MMP21Q8N119 569 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 ATAD1Q8NBU5 361 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 PANK1Q8TE04 598 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 SAP25Q8TEE9 199 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 IPO4Q8TEX9 1081 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 TCP11Q8WWU5 503 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 SLC5A5Q92911 643 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 TOE1Q96GM8 510 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 TMEM87BQ96K49 555 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 DMRTB1Q96MA1 342 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 FANCD2OSQ96PS1 177 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 GPR174Q9BXC1 333 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 RBCK1Q9BYM8 510 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 ADNPQ9H2P0 1102 aa3.54□□□□□ -1.84
PMS1-215ENST00000447232 USP36Q9P275 1121 aaKnown RBP3.54□□□□□ -1.84
PMS1-215ENST00000447232 MYOFQ9NZM1 2061 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 A0A1W2PNU3 283 aaPredicted RBP3.53□□□□□ -1.84
PMS1-215ENST00000447232 PODXLO00592 558 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 IFIT3O14879 490 aaKnown RBP3.53□□□□□ -1.84
PMS1-215ENST00000447232 EDIL3O43854 480 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 TADA3O75528 432 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 PSMD10O75832 226 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 DDAH1O94760 285 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 LARGE1O95461 756 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 SLFN14P0C7P3 912 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 HMGA1P17096 107 aaKnown RBP3.53□□□□□ -1.84
PMS1-215ENST00000447232 CKMT2P17540 419 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 ACP1P24666 158 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 NTSR1P30989 418 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 GNAQP50148 359 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 CAPSQ13938 189 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 MXD4Q14582 209 aaPredicted RBP3.53□□□□□ -1.84
PMS1-215ENST00000447232 EMC2Q15006 297 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 SHBQ15464 509 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 IMMTQ16891 758 aaKnown RBP3.53□□□□□ -1.84
PMS1-215ENST00000447232 PRR16Q569H4 304 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 XKR4Q5GH76 650 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 USP53Q70EK8 1073 aa3.53□□□□□ -1.84
PMS1-215ENST00000447232 HEATR3Q7Z4Q2 680 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms