RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TCEA3O75764 348 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 BDNFP23560 247 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 SPARCL1Q14515 664 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 KCNJ11Q14654 390 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 NCBP2-AS2Q69YL0 99 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 FAM35AQ86V20 835 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 STK32AQ8WU08 396 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 CKAP2Q8WWK9 683 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 AGAP3Q96P47 875 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 SMOQ99835 787 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ANLNQ9NQW6 1124 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ZC3H7BQ9UGR2 993 aaKnown RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 VAV1P15498 845 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 TGM2P21980 687 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ADRA1DP25100 572 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 GBP2P32456 591 aaPredicted RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 PTPN9P43378 593 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 FCGRTP55899 365 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 SESN2P58004 480 aaPredicted RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 PCBP1Q15365 356 aaKnown RBP eCLIP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 DPYSL2Q16555 572 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 XKR4Q5GH76 650 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 NAIF1Q69YI7 327 aaPredicted RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ZDHHC17Q8IUH5 632 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 TOP6BLQ8N6T0 577 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 HSFY1Q96LI6 401 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 AOC2O75106 756 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 OR4Q2P0C623 313 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ACADSBP45954 432 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 FAAP100Q0VG06 881 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 PTK7Q13308 1070 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 LVRNQ6Q4G3 990 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 VPS52Q8N1B4 723 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 TEKT4Q8WW24 435 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 SENP6Q9GZR1 1112 aaPredicted RBP17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 DDIT4Q9NX09 232 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 SLC17A7Q9P2U7 560 aa17.4■□□□□ 0.38
LAPTM4B-201ENST00000445593 CXorf49A8MYA2 514 aaPredicted RBP17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 INHBAP08476 426 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 NEFHP12036 1026 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 SLC25A52Q3SY17 297 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 RNF139Q8WU17 664 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 FRMD8P1Q9BZ68 369 aaPredicted RBP17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 SNX3O60493 162 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 USP12O75317 370 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 ATP2A2P16615 1042 aaKnown RBP17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 IL9RQ01113 521 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 TRMT10BQ6PF06 316 aaKnown RBP17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 ZMIZ2Q8NF64 920 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 RNF34Q969K3 372 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 PITPNM3Q9BZ71 974 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 ACSS3Q9H6R3 686 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 NUP205Q92621 2012 aa17.39■□□□□ 0.37
LAPTM4B-201ENST00000445593 CPP00450 1065 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 GJA9P57773 515 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 EFHC2Q5JST6 749 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 CES3Q6UWW8 571 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 CAND1Q86VP6 1230 aaKnown RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 TTLL3Q9Y4R7 772 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 FAM155AB1AL88 458 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 LRPAP1P30533 357 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SLC45A4Q5BKX6 768 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 CDKL3Q8IVW4 592 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 PDCD7Q8N8D1 485 aaKnown RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 ZNF513Q8N8E2 541 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCDC63Q8NA47 563 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 C11orf84Q9BUA3 381 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SIK2Q9H0K1 926 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 HAUS2Q9NVX0 235 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 FZD10Q9ULW2 581 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCDC78A2IDD5 438 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SRRM3A6NNA2 597 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 I6L893 689 aaPredicted RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 TAC1P20366 129 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 OVGP1Q12889 678 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SDHAF4Q5VUM1 108 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 PIGWQ7Z7B1 504 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SERINC5Q86VE9 423 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SPATS2Q86XZ4 545 aaKnown RBP17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 SCAMP5Q8TAC9 235 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 TCP10LQ8TDR4 215 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 TMLHEQ9NVH6 421 aa17.38■□□□□ 0.37
LAPTM4B-201ENST00000445593 E2F8A0AVK6 867 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 CCT8L1PA6NM43 557 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 EEF2KO00418 725 aaKnown RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SPATA21Q7Z572 469 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 HACE1Q8IYU2 909 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 DCAKDQ8WVC6 231 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 CENPIQ92674 756 aaPredicted RBP17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 RMDN2Q96LZ7 410 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 CYTH2Q99418 400 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 SLC38A7Q9NVC3 462 aa17.37■□□□□ 0.37
LAPTM4B-201ENST00000445593 RNF186Q9NXI6 227 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms