RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ZNF670Q9BS34 389 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 PAPOLBQ9NRJ5 636 aaKnown RBP17.11■□□□□ 0.33
TCOF1-206ENST00000445265 SNX5Q9Y5X3 404 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 NFS1Q9Y697 457 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 CLUHO75153 1309 aa17.11■□□□□ 0.33
TCOF1-206ENST00000445265 CDKN2BP42772 138 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 ARHGDIAP52565 204 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 PTPN20Q4JDL3 420 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 UNC93AQ86WB7 457 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 ACMSDQ8TDX5 336 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
TCOF1-206ENST00000445265 KRT82Q9NSB4 513 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 A0A0A0MRY4 1105 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 CXCL11O14625 94 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 MYL4P12829 197 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 PAX7P23759 505 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 FAM183BPQ6ZVS7 135 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 HIC2Q96JB3 615 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 SPATA13Q96N96 652 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 A0A096LPK6 155 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 KCNA2P16389 499 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 GLRBP48167 497 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
TCOF1-206ENST00000445265 JOSD2Q8TAC2 188 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 TRHDEQ9UKU6 1024 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
TCOF1-206ENST00000445265 CETPP11597 493 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 TKTL1P51854 596 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 IMPG1Q17R60 797 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 ZNF410Q86VK4 478 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 DDI1Q8WTU0 396 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 SSU72Q9NP77 194 aaKnown RBP17.1■□□□□ 0.33
TCOF1-206ENST00000445265 PKD2L2Q9NZM6 624 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
TCOF1-206ENST00000445265 NPY2RP49146 381 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 CDH17Q12864 832 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 CELF3Q5SZQ8 465 aaKnown RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 RNASEH2BQ5TBB1 312 aaKnown RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 PLPPR4Q7Z2D5 763 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 DEFB106AQ8N104 65 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 CCT7Q99832 543 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 EBNA1BP2Q99848 306 aaKnown RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 SLC1A5Q15758 541 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 ZNF862O60290 1169 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 PIAS1O75925 651 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 NOVP48745 357 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 BIRC2Q13490 618 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 ADRM1Q16186 407 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 BIRC5O15392 142 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 B4GALT4O60513 344 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 DDHD2O94830 711 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 DNAJB2P25686 324 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 GRIK4Q16099 956 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 RBBP7Q16576 425 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 TMEM259Q4ZIN3 620 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 TIGD7Q6NT04 549 aaPredicted RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 EFL1Q7Z2Z2 1120 aaKnown RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 NET1Q7Z628 596 aaPredicted RBP17.09■□□□□ 0.33
TCOF1-206ENST00000445265 CLNKQ7Z7G1 428 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 VTI1BQ9UEU0 232 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 PCDHGC3Q9UN70 934 aa17.09■□□□□ 0.33
TCOF1-206ENST00000445265 NDUFS3O75489 264 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 CTSHP09668 335 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 ATP6V1C1P21283 382 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 XPAP23025 273 aaPredicted RBP17.08■□□□□ 0.33
TCOF1-206ENST00000445265 AVPR1AP37288 418 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 LHX1P48742 406 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 OCA2Q04671 838 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 NOMO1Q15155 1222 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 CEP41Q9BYV8 373 aa17.08■□□□□ 0.33
TCOF1-206ENST00000445265 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.33
TCOF1-206ENST00000445265 KCNMB4Q86W47 210 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 FAM13CQ8NE31 585 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SLC44A1Q8WWI5 657 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CPT1BQ92523 772 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ZNF317Q96PQ6 595 aaPredicted RBP17.08■□□□□ 0.32
TCOF1-206ENST00000445265 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SLC17A7Q9P2U7 560 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 PCDHA11Q9Y5I1 949 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 LRCH4O75427 683 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 PYGLP06737 847 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ODC1P11926 461 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SATB1Q01826 763 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 AASDHQ4L235 1098 aaPredicted RBP17.08■□□□□ 0.32
TCOF1-206ENST00000445265 EMC10Q5UCC4 262 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ADGRD1Q6QNK2 874 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 LAYNQ6UX15 382 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 ANKS1BQ7Z6G8 1248 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 OSMRQ99650 979 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 SLC12A4Q9UP95 1085 aa17.08■□□□□ 0.32
TCOF1-206ENST00000445265 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms