RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 ZNF23P17027 643 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 CDH5P33151 784 aaPredicted RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 HSPA13P48723 471 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 ACOT2P49753 483 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 SERPINB9P50453 376 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 HSD17B4P51659 736 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 MRPS22P82650 360 aaKnown RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 KLF10Q13118 480 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 MPP3Q13368 585 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 PCLAFQ15004 111 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 TAF5Q15542 800 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 HADHQ16836 314 aaKnown RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 SLC44A4Q53GD3 710 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 SCARA3Q6AZY7 606 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 GPAT2Q6NUI2 795 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 ZFP1Q6P2D0 407 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 CMASQ8NFW8 434 aaPredicted RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 KBTBD7Q8WVZ9 684 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 RSPH1Q8WYR4 309 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 SLC35B4Q969S0 331 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 TRIM56Q9BRZ2 755 aaKnown RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 INO80BQ9C086 356 aaPredicted RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 ZNF518BQ9C0D4 1074 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 DEFB129Q9H1M3 183 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 COPS7BQ9H9Q2 264 aaPredicted RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 TBC1D22BQ9NU19 505 aa10.35□□□□□ -0.75
CASP4-203ENST00000444739 HERC5Q9UII4 1024 aaKnown RBP10.35□□□□□ -0.75
CASP4-203ENST00000444739 BTAF1O14981 1849 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 PLIN3O60664 434 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 THRAP10827 490 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 EIF4BP23588 611 aaKnown RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 HOXA10P31260 410 aaPredicted RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 MRPS9P82933 396 aaKnown RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 CNTN2Q02246 1040 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 N4BP2L1Q5TBK1 243 aaPredicted RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 PATL1Q86TB9 770 aaKnown RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 LDHDQ86WU2 507 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 KCTD6Q8NC69 237 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 FNIP1Q8TF40 1166 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 TMIGD2Q96BF3 282 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 CSRNP1Q96S65 589 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 SLX1AQ9BQ83 275 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 LIN28AQ9H9Z2 209 aaKnown RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 INIPQ9NRY2 104 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 HOMER2Q9NSB8 354 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 PAK5Q9P286 719 aa10.34□□□□□ -0.75
CASP4-203ENST00000444739 PRPF19Q9UMS4 504 aaKnown RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
CASP4-203ENST00000444739 PRSS51A0A1B0GVH4 220 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 KANSL1LA0AUZ9 987 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 DKC1O60832 514 aaKnown RBP eCLIP10.33□□□□□ -0.76
CASP4-203ENST00000444739 TRPA1O75762 1119 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 CCNE2O96020 404 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PRKCGP05129 697 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 KRT3P12035 628 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 IDO1P14902 403 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PORP16435 677 aaPredicted RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 MAGEA3P43357 314 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 MAGEA6P43360 314 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 STT3AP46977 705 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 MTMR1Q13613 665 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PDK1Q15118 436 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PTPN20Q4JDL3 420 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PACS1Q6VY07 963 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 CHERPQ8IWX8 916 aaKnown RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 TSPAN14Q8NG11 270 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 OR5B17Q8NGF7 314 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 GSDMBQ8TAX9 411 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 ACER1Q8TDN7 264 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PPP4R1Q8TF05 950 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 LRRC39Q96DD0 335 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PKP2Q99959 881 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 HAPLN2Q9GZV7 340 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 SDCBP2Q9H190 292 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PLGRKTQ9HBL7 147 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 TJP2Q9UDY2 1190 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 PCSK1NQ9UHG2 260 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 AGO2Q9UKV8 859 aaKnown RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 FAF1Q9UNN5 650 aaPredicted RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 RNF11Q9Y3C5 154 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 ZNF711Q9Y462 761 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 GLRA3O75311 464 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 CD1EP15812 388 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 XRCC1P18887 633 aaPredicted RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 GRK2P25098 689 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 HARS2P49590 506 aaKnown RBP10.33□□□□□ -0.76
CASP4-203ENST00000444739 NUMBP49757 651 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 LIG4P49917 911 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 THOP1P52888 689 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 HSPA2P54652 639 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 FLOT2Q14254 428 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 ACAP1Q15027 740 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 ZNF423Q2M1K9 1284 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 FSCBQ5H9T9 825 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 ZBTB41Q5SVQ8 909 aa10.33□□□□□ -0.76
CASP4-203ENST00000444739 NCCRP1Q6ZVX7 275 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms