RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PLXNA2O75051 1894 aa11.37□□□□□ -0.59
SF3A1-203ENST00000444440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 LRP3O75074 770 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 FGFR1OPO95684 399 aaKnown RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 IGLV3-27P01718 113 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 KRT5P13647 590 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 GABRG2P18507 467 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 PON1P27169 355 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MPLP40238 635 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 P2RY2P41231 377 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 RPL34P49207 117 aaKnown RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MFAP3P55082 362 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 SLC8A3P57103 927 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 LMNB2Q03252 620 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 CETN1Q12798 172 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 PUM1Q14671 1186 aaKnown RBP eCLIP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MIIPQ5JXC2 388 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 EOGTQ5NDL2 527 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 PMS2CLQ68D20 193 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MSANTD2Q6P1R3 559 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 TADA2BQ86TJ2 420 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 CPXM2Q8N436 756 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MLKLQ8NB16 471 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 WFDC5Q8TCV5 224 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 HMGB4Q8WW32 186 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 PLD4Q96BZ4 506 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MYEOVQ96EZ4 313 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 LOXL4Q96JB6 756 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 CDK5RAP1Q96SZ6 601 aaKnown RBP11.36□□□□□ -0.59
SF3A1-203ENST00000444440 MIS12Q9H081 205 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 CACNA2D2Q9NY47 1150 aa11.36□□□□□ -0.59
SF3A1-203ENST00000444440 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 DCDC2BA2VCK2 349 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 PATE3B3GLJ2 98 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 TSPAN3O60637 253 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 LETM1O95202 739 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 LTFP02788 710 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 ZNF806P0C7X5 589 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 HOXB2P14652 356 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 NDUFV2P19404 249 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 HOXD9P28356 352 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 NTSR1P30989 418 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 SLC6A4P31645 630 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 GBP1P32455 592 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 PITX1P78337 314 aaPredicted RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 STILQ15468 1287 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 NADSYN1Q6IA69 706 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 ERMP1Q7Z2K6 904 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 DGLUCYQ7Z3D6 616 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 WDTC1Q8N5D0 677 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 CCDC26Q8TAB7 109 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 GPT2Q8TD30 523 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 IPO4Q8TEX9 1081 aaKnown RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 ZNF606Q8WXB4 792 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 SORCS1Q8WY21 1168 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 IRGQQ8WZA9 623 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 HSFY1Q96LI6 401 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 GABRG3Q99928 467 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 DCLK3Q9C098 648 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 NUP62CLQ9H1M0 184 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 ABCC13Q9NSE7 274 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 OLA1Q9NTK5 396 aaKnown RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 STRIP2Q9ULQ0 834 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 ZNF510Q9Y2H8 683 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 SLC27A6Q9Y2P4 619 aa11.35□□□□□ -0.59
SF3A1-203ENST00000444440 HBS1LQ9Y450 684 aaKnown RBP11.35□□□□□ -0.59
SF3A1-203ENST00000444440 BCLAF3A2AJT9 711 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 E5RJQ4 531 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 PAPSS1O43252 624 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 THAP12O43422 761 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 GNA15P30679 374 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CHKAP35790 457 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 IL12RB1P42701 662 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CREB5Q02930 508 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 KCNMA1Q12791 1236 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 TAF5Q15542 800 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 EXOC3L4Q17RC7 722 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 USP39Q53GS9 565 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 FAM133BQ5BKY9 247 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 SYPL2Q5VXT5 272 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 RFWD3Q6PCD5 774 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CHPFQ8IZ52 775 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 DQX1Q8TE96 717 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 RNF139Q8WU17 664 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 SHC3Q92529 594 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 FCRL2Q96LA5 508 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 PRICKLE1Q96MT3 831 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 THAP9Q9H5L6 903 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 POLMQ9NP87 494 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 ST7Q9NRC1 585 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms