RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 IFNEQ86WN2 208 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 TREML1Q86YW5 311 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 MMAAQ8IVH4 418 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 GALNT12Q8IXK2 581 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ANKRD13AQ8IZ07 590 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 FBXO36Q8NEA4 188 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 OR8H1Q8NGG4 311 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 PPP1R36Q96LQ0 422 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 RMDN3Q96TC7 470 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 FAM118BQ9BPY3 351 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZSCAN5AQ9BUG6 496 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ELOVL6Q9H5J4 265 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 WDR41Q9HAD4 459 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZFYVE28Q9HCC9 887 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF304Q9HCX3 659 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 FBXO6Q9NRD1 293 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF277Q9NRM2 450 aaPredicted RBP5.29□□□□□ -1.56
SCN11A-202ENST00000444237 NEDD4P46934 1319 aa5.29□□□□□ -1.56
SCN11A-202ENST00000444237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 K7EPI3 171 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TNFRSF10AO00220 468 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CRTAMO95727 393 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 AMPD1P23109 780 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SPRP35270 261 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 MMRN1Q13201 1228 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 HMBOX1Q6NT76 420 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 DUS1LQ6P1R4 473 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PDXDC2PQ6P474 469 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 KYAT3Q6YP21 454 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RASSF6Q6ZTQ3 369 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 KRT74Q7RTS7 529 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SNX32Q86XE0 403 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PALB2Q86YC2 1186 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 MICALL2Q8IY33 904 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FAM9CQ8IZT9 166 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FBXL16Q8N461 479 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SIPA1Q96FS4 1042 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FAM89AQ96GI7 184 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 EYA3Q99504 573 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 THAP2Q9H0W7 228 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GPRC5DQ9NZD1 345 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PKD2L1Q9P0L9 805 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PAK5Q9P286 719 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 VTI1BQ9UEU0 232 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LGALS13Q9UHV8 139 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ABT1Q9ULW3 272 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 EFR3BQ9Y2G0 817 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SALL1Q9NSC2 1324 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PP2D1A8MPX8 630 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 B8ZZF3 427 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 USP17L12C9JPN9 530 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 USP17L21D6R901 530 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 UFL1O94874 794 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF806P0C7X5 589 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PAMP19021 973 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CD58P19256 250 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SLC9A1P19634 815 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PIK3R1P27986 724 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GRK3P35626 688 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TCF7P36402 384 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PHKA2P46019 1235 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 MAPK12P53778 367 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 EIF3EP60228 445 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 IL5RAQ01344 420 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RHAGQ02094 409 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FOXD4Q12950 439 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 SLC12A1Q13621 1099 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ARCQ7LC44 396 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF571Q7Z3V5 609 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 STK32CQ86UX6 486 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ZBTB46Q86UZ6 589 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CDAN1Q8IWY9 1227 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RASGEF1CQ8N431 466 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 IL17REQ8NFR9 667 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PIWIL2Q8TC59 973 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 TRUB1Q8WWH5 349 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 HAPLN3Q96S86 360 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 C11orf70Q9BRQ4 267 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FARSBQ9NSD9 589 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 DNAJC11Q9NVH1 559 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 GMIPQ9P107 970 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CDH22Q9UJ99 828 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PTBP2Q9UKA9 531 aaKnown RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 N6AMT1Q9Y5N5 214 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 EFCAB10A6NFE3 127 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 APOL3O95236 402 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-202ENST00000444237 PRKCBP05771 671 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RALAP11233 206 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ARL4AP40617 200 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 ITGA1P56199 1179 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 FAM122CQ6P4D5 195 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 LAYNQ6UX15 382 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CCDC36Q8IYA8 594 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 CHCHD4Q8N4Q1 142 aa5.28□□□□□ -1.56
SCN11A-202ENST00000444237 RDM1Q8NG50 284 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms