RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 RBBP9O75884 186 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 GCNT3O95395 438 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 HRGP04196 525 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 BPIP17213 487 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 EEF1DP29692 281 aaKnown RBP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 KYAT1Q16773 422 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 SPDYAQ5MJ70 313 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 SIAH1Q8IUQ4 282 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 MCEMP1Q8IX19 187 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 FUT8Q9BYC5 575 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF341Q9BYN7 854 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 TASP1Q9H6P5 420 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 SOHLH2Q9NX45 425 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 TAS2R7Q9NYW3 318 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 WHRNQ9P202 907 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 FAM8A1Q9UBU6 413 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF879B4DU55 563 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 E9PBE3 544 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 GCOM1H8Y6P7 765 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 ITGB3P05106 788 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 GALTP07902 379 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 MYZAPP0CAP1 466 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 IL2RBP14784 551 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 CHMP24386 653 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 AARSP49588 968 aaKnown RBP eCLIP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 MAP3K10Q02779 954 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 USP10Q14694 798 aaKnown RBP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 TOR1AIP1Q5JTV8 583 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 TEX35Q5T0J7 233 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 RRAGBQ5VZM2 374 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 BBS5Q8N3I7 341 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 GALNT15Q8N3T1 639 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 IGSF22Q8N9C0 903 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 TDRD1Q9BXT4 1180 aaKnown RBP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 CRNKL1Q9BZJ0 848 aaKnown RBP10.91□□□□□ -0.66
SYNE2-206ENST00000441438 NDEL1Q9GZM8 345 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 NUDT15Q9NV35 164 aa10.91□□□□□ -0.66
SYNE2-206ENST00000441438 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC151A5D8V7 595 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 DDX3XO00571 662 aaKnown RBP eCLIP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 GSNP06396 782 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 AKT1P31749 480 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 GFPT1Q06210 699 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ELP6Q0PNE2 266 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ACVR2BQ13705 512 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 IZUMO3Q5VZ72 239 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 DSG4Q86SJ6 1040 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 LRRC6Q86X45 466 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF669Q96BR6 464 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 FCRL4Q96PJ5 515 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ZCCHC2Q9C0B9 1178 aaKnown RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 INIPQ9NRY2 104 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 CORO2BQ9UQ03 480 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 CLCA2Q9UQC9 943 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 FPGT-TNNI3KV9GXZ4 949 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 BLACEA4D250 179 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 KCNQ3O43525 872 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 GAAP10253 952 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 RARBP10826 455 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ETV5P41161 510 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ADCY7P51828 1080 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 LUMP51884 338 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ARF3P61204 181 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ARF1P84077 181 aaKnown RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 OCRLQ01968 901 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 MTMR2Q13614 643 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 STILQ15468 1287 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 HFEQ30201 348 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 GTF2IRD2BQ6EKJ0 949 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 SV2BQ7L1I2 683 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 GTF2IRD2Q86UP8 949 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 VPS33AQ96AX1 596 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF653Q96CK0 615 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 CFAP57Q96MR6 1250 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 ZNF560Q96MR9 790 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 MRPL37Q9BZE1 423 aaKnown RBP10.9□□□□□ -0.66
SYNE2-206ENST00000441438 FAM204AQ9H8W3 233 aa10.9□□□□□ -0.66
SYNE2-206ENST00000441438 hCG_1809904A0A1W2PP81 198 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 A0A1W2PPE2 198 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 A0A1W2PR64 198 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 GOLGA8CPA6NN73 597 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 ERVV-2B6SEH9 535 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 PHF2O75151 1096 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 KCNA5P22460 613 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 UBE2HP62256 183 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 YWHAHQ04917 246 aaPredicted RBP10.9□□□□□ -0.67
SYNE2-206ENST00000441438 DNAJC3Q13217 504 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 SLC39A14Q15043 492 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 SMAD2Q15796 467 aaKnown RBP10.9□□□□□ -0.67
SYNE2-206ENST00000441438 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 LIN9Q5TKA1 542 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 KLHDC7AQ5VTJ3 777 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 INTS5Q6P9B9 1019 aaKnown RBP10.9□□□□□ -0.67
SYNE2-206ENST00000441438 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 RETREG3Q86VR2 466 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 TPRA1Q86W33 373 aa10.9□□□□□ -0.67
SYNE2-206ENST00000441438 MARCH10Q8NA82 808 aaPredicted RBP10.9□□□□□ -0.67
SYNE2-206ENST00000441438 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms