RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TRIM49D1C9J1S8 452 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 MATN2O00339 956 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 OCM2P0CE71 109 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 OCMP0CE72 109 aaPredicted RBP17.34■□□□□ 0.37
PMS1-213ENST00000441310 TCF4P15884 667 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 AOC1P19801 751 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 SFNP31947 248 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 SLC5A3P53794 718 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 PRKCEQ02156 737 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 SLC2A7Q6PXP3 512 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 CTAGE3PQ8IX95 158 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 MMP19Q99542 508 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 SLC9A2Q9UBY0 812 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 RAB26Q9ULW5 256 aa17.34■□□□□ 0.37
PMS1-213ENST00000441310 UBE4BO95155 1302 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 SDR42E2A6NKP2 422 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 ATXN3P54252 364 aaPredicted RBP17.33■□□□□ 0.37
PMS1-213ENST00000441310 GTF2BQ00403 316 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 RARS2Q5T160 578 aaKnown RBP17.33■□□□□ 0.37
PMS1-213ENST00000441310 MFSD7Q6UXD7 560 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 KBTBD6Q86V97 674 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 GRIN3AQ8TCU5 1115 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 POMGNT1Q8WZA1 660 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 SENP7Q9BQF6 1050 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 TCHPQ9BT92 498 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.37
PMS1-213ENST00000441310 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 KLF11O14901 512 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 GRIN3BO60391 1043 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 LYPLA2O95372 231 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 IL1BP01584 269 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 SLC18A2Q05940 514 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 ATP1A4Q13733 1029 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.36
PMS1-213ENST00000441310 TSPAN14Q8NG11 270 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 OTUD5Q96G74 571 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 COPS7BQ9H9Q2 264 aaPredicted RBP17.33■□□□□ 0.36
PMS1-213ENST00000441310 TRNAU1APQ9NX07 287 aaKnown RBP17.33■□□□□ 0.36
PMS1-213ENST00000441310 MAP3K20Q9NYL2 800 aaKnown RBP17.33■□□□□ 0.36
PMS1-213ENST00000441310 SAE1Q9UBE0 346 aaPredicted RBP17.33■□□□□ 0.36
PMS1-213ENST00000441310 FADS3Q9Y5Q0 445 aa17.33■□□□□ 0.36
PMS1-213ENST00000441310 TCRBV7S3A2A0A539 114 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 HNRNPDLO14979 420 aaKnown RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 KRT1P04264 644 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 CDK9P50750 372 aaKnown RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 MRPS22P82650 360 aaKnown RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 CPNE9Q8IYJ1 553 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 KATNAL2Q8IYT4 538 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 DDX1Q92499 740 aaKnown RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 GPRASP2Q96D09 838 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 HEPHQ9BQS7 1158 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 TBC1D23Q9NUY8 699 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 PSMD13Q9UNM6 376 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 COL11A1P12107 1806 aaPredicted RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 PSTPIP1O43586 416 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 MSX2P35548 267 aaPredicted RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 YWHAGP61981 247 aaKnown RBP eCLIP17.32■□□□□ 0.36
PMS1-213ENST00000441310 DYNLT1P63172 113 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 SLC9A9Q8IVB4 645 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 EXD1Q8NHP7 514 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 PPP1R14CQ8TAE6 165 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 ACTRT2Q8TDY3 377 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 PI4K2AQ9BTU6 479 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 KIAA1217Q5T5P2 1943 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 LYPLA1O75608 230 aaPredicted RBP17.32■□□□□ 0.36
PMS1-213ENST00000441310 CPA3P15088 417 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 ITGAXP20702 1163 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 IGDCC3Q8IVU1 814 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 CCDC33Q8N5R6 958 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 CASP10Q92851 521 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 ANKEF1Q9NU02 776 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 FETUBQ9UGM5 382 aa17.32■□□□□ 0.36
PMS1-213ENST00000441310 NDUFB5O43674 189 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 TOM1L1O75674 476 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 PHKA2P46019 1235 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 OGFOD2Q6N063 350 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 FBXW8Q8N3Y1 598 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 CPT1BQ92523 772 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 ATP6V0A1Q93050 837 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 RAB20Q9NX57 234 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 ZNHIT2Q9UHR6 403 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 PPME1Q9Y570 386 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 FUCA1P04066 466 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 PSAPP07602 524 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 EIF2B2P49770 351 aaKnown RBP17.31■□□□□ 0.36
PMS1-213ENST00000441310 SLC39A4Q6P5W5 647 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 SH2D5Q6ZV89 423 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 HSPH1Q92598 858 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 FAM213AQ9BRX8 229 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 CAAP1Q9H8G2 361 aa17.31■□□□□ 0.36
PMS1-213ENST00000441310 TMX2-CTNND1H3BSU7 103 aa17.3■□□□□ 0.36
PMS1-213ENST00000441310 ZBED1O96006 694 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms