RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TRIML1Q8N9V2 468 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 ERLEC1Q96DZ1 483 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 P2RY11Q96G91 374 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 ZNF419Q96HQ0 510 aaPredicted RBP12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 HSPA12BQ96MM6 686 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 GSDMAQ96QA5 445 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 GDPD2Q9HCC8 539 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 OLA1Q9NTK5 396 aaKnown RBP12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 THAP10Q9P2Z0 257 aaPredicted RBP12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 HESX1Q9UBX0 185 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 WASF3Q9UPY6 502 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 RAD54BQ9Y620 910 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 ZZEF1O43149 2961 aa12.18□□□□□ -0.46
UBE2D4-204ENST00000440899 CACNA1EQ15878 2313 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 TIMM44O43615 452 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 OPHN1O60890 802 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 SMC2O95347 1197 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 PROS1P07225 676 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 SYPP08247 313 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 PDE4CQ08493 712 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 BST2Q10589 180 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 SEMA3BQ13214 749 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 CUL2Q13617 745 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ENPP2Q13822 863 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 EIF4HQ15056 248 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 GEN1Q17RS7 908 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 FUT11Q495W5 492 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 CBWD6Q4V339 395 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 CBWD3Q5JTY5 395 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 WDR45BQ5MNZ6 344 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 CBWD5Q5RIA9 395 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ZNF658Q5TYW1 1059 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ANKRD40Q6AI12 368 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ANKS1BQ7Z6G8 1248 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 FAM217AQ8IXS0 508 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 RGL4Q8IZJ4 473 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 DDI1Q8WTU0 396 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 PLD4Q96BZ4 506 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 GTPBP2Q9BX10 602 aaKnown RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ULBP1Q9BZM6 244 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 SLC6A17Q9H1V8 727 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 PRDM16Q9HAZ2 1276 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 LRRC4Q9HBW1 653 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ELOVL2Q9NXB9 296 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 SUSD2Q9UGT4 822 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 ARMCX3Q9UH62 379 aaPredicted RBP12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 KIAA1257Q9ULG3 409 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 PCNX2A6NKB5 2137 aa12.17□□□□□ -0.46
UBE2D4-204ENST00000440899 TULP2O00295 520 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 SYNCRIPO60506 623 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 VDRP11473 427 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 CD19P15391 556 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 GNSP15586 552 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 TBXAS1P24557 533 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 CD6P30203 668 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 HARS2P49590 506 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 LRRC63Q05C16 580 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 GOLGA7BQ2TAP0 167 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 UNQ6494/PRO21346Q6UXR6 183 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 BHLHA9Q7RTU4 235 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 FMNL3Q8IVF7 1028 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 MINDY1Q8N5J2 469 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 SPATA20Q8TB22 786 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 SIPA1Q96FS4 1042 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 MKRN2Q9H000 416 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 ITM2CQ9NQX7 267 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 WSB2Q9NYS7 404 aaPredicted RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 USP36Q9P275 1121 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 HBS1LQ9Y450 684 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 NFE2L3Q9Y4A8 694 aa12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
UBE2D4-204ENST00000440899 IGF2RP11717 2491 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 OXTRP30559 389 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 IL12RB1P42701 662 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ZNF445P59923 1031 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ADIGQ0VDE8 80 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SLC14A1Q13336 389 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 STIM1Q13586 685 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ZNF234Q14588 700 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 PLEKHG6Q3KR16 790 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 MPPE1Q53F39 396 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 BSPRYQ5W0U4 402 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 TMPRSS6Q8IU80 811 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SIX6OS1Q8N1H7 587 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SCML4Q8N228 414 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ENGASEQ8NFI3 743 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms